Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.95■□□□□ 0.62
Col20a1Q923P0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.94■□□□□ 0.62
Col20a1Q923P0 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.94■□□□□ 0.62
Col20a1Q923P0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Col20a1Q923P0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.93■□□□□ 0.62
Col20a1Q923P0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col20a1Q923P0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Gm27525-201ENSMUST00000184465 107 ntBASIC18.92■□□□□ 0.62
Col20a1Q923P0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.92■□□□□ 0.62
Col20a1Q923P0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.91■□□□□ 0.62
Col20a1Q923P0 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.91■□□□□ 0.62
Col20a1Q923P0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Col20a1Q923P0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col20a1Q923P0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col20a1Q923P0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Col20a1Q923P0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms