Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna3Q8R4G9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 Gm27459-201ENSMUST00000184860 107 ntBASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chrna3Q8R4G9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chrna3Q8R4G9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Chrna3Q8R4G9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chrna3Q8R4G9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chrna3Q8R4G9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chrna3Q8R4G9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Chrna3Q8R4G9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Chrna3Q8R4G9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chrna3Q8R4G9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chrna3Q8R4G9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Chrna3Q8R4G9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chrna3Q8R4G9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chrna3Q8R4G9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms