Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Mir6956-201ENSMUST00000183598 62 ntBASIC18.16■□□□□ 0.5
Syne4Q8CII8 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.16■□□□□ 0.5
Syne4Q8CII8 Gm7787-201ENSMUST00000216858 688 ntBASIC18.16■□□□□ 0.5
Syne4Q8CII8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne4Q8CII8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Gm15358-201ENSMUST00000119249 520 ntBASIC18.15■□□□□ 0.5
Syne4Q8CII8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.15■□□□□ 0.5
Syne4Q8CII8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.15■□□□□ 0.5
Syne4Q8CII8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne4Q8CII8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.14■□□□□ 0.5
Syne4Q8CII8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Syne4Q8CII8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Gm17968-201ENSMUST00000194902 784 ntBASIC18.14■□□□□ 0.49
Syne4Q8CII8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne4Q8CII8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.13■□□□□ 0.49
Syne4Q8CII8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.13■□□□□ 0.49
Syne4Q8CII8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne4Q8CII8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Syne4Q8CII8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne4Q8CII8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne4Q8CII8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne4Q8CII8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne4Q8CII8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne4Q8CII8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne4Q8CII8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Syne4Q8CII8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Syne4Q8CII8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne4Q8CII8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Syne4Q8CII8 Gm27494-201ENSMUST00000184735 189 ntBASIC18.12■□□□□ 0.49
Syne4Q8CII8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne4Q8CII8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Syne4Q8CII8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne4Q8CII8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syne4Q8CII8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms