Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rab11fip3Q8CHD8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Rab11fip3Q8CHD8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip3Q8CHD8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip3Q8CHD8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip3Q8CHD8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip3Q8CHD8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.75■□□□□ 0.91
Rab11fip3Q8CHD8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip3Q8CHD8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip3Q8CHD8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip3Q8CHD8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rab11fip3Q8CHD8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip3Q8CHD8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Haglr-201ENSMUST00000100000 2085 ntBASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Gm8344-201ENSMUST00000119813 856 ntBASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Gm6257-201ENSMUST00000163864 910 ntBASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip3Q8CHD8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip3Q8CHD8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms