Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lysmd4Q8CC84 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Lysmd4Q8CC84 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lysmd4Q8CC84 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd4Q8CC84 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Gm13168-201ENSMUST00000121771 632 ntBASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Gm10653-202ENSMUST00000139570 835 ntBASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lysmd4Q8CC84 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Gm8520-201ENSMUST00000186517 868 ntBASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lysmd4Q8CC84 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Mir1199-201ENSMUST00000117015 119 ntBASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Gm11539-201ENSMUST00000119837 557 ntBASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.42□□□□□ -0.1
Lysmd4Q8CC84 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms