Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.99■□□□□ 0.95
Col16a1Q8BLX7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Mir6990-201ENSMUST00000183724 91 ntBASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col16a1Q8BLX7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Gm43474-201ENSMUST00000196415 774 ntBASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Col16a1Q8BLX7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col16a1Q8BLX7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.96■□□□□ 0.95
Col16a1Q8BLX7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.96■□□□□ 0.95
Col16a1Q8BLX7 Gm6226-201ENSMUST00000117765 1146 ntBASIC20.96■□□□□ 0.95
Col16a1Q8BLX7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC20.96■□□□□ 0.95
Col16a1Q8BLX7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC20.96■□□□□ 0.95
Col16a1Q8BLX7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Col16a1Q8BLX7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col16a1Q8BLX7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col16a1Q8BLX7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col16a1Q8BLX7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col16a1Q8BLX7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col16a1Q8BLX7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col16a1Q8BLX7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col16a1Q8BLX7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.95■□□□□ 0.94
Col16a1Q8BLX7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col16a1Q8BLX7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Col16a1Q8BLX7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Col16a1Q8BLX7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col16a1Q8BLX7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Col16a1Q8BLX7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.94■□□□□ 0.94
Col16a1Q8BLX7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.94■□□□□ 0.94
Col16a1Q8BLX7 Gm27301-201ENSMUST00000184012 127 ntBASIC20.94■□□□□ 0.94
Col16a1Q8BLX7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col16a1Q8BLX7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col16a1Q8BLX7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Col16a1Q8BLX7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col16a1Q8BLX7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col16a1Q8BLX7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC20.94■□□□□ 0.94
Col16a1Q8BLX7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Col16a1Q8BLX7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col16a1Q8BLX7 Gm43125-201ENSMUST00000201724 730 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms