Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc1Q6TDU8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc1Q6TDU8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 AA414768-201ENSMUST00000121924 1257 ntBASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Casc1Q6TDU8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Casc1Q6TDU8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Casc1Q6TDU8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casc1Q6TDU8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms