Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.1□□□□□ -0.95
Sox16Q62247 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Sox16Q62247 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Gm27528-202ENSMUST00000222916 2012 ntBASIC9.1□□□□□ -0.95
Sox16Q62247 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
Sox16Q62247 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Gm37820-201ENSMUST00000194021 2147 ntBASIC9.1□□□□□ -0.95
Sox16Q62247 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sox16Q62247 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Sox16Q62247 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Sox16Q62247 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Sox16Q62247 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.09□□□□□ -0.95
Sox16Q62247 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC9.09□□□□□ -0.95
Sox16Q62247 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Sox16Q62247 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC9.09□□□□□ -0.95
Sox16Q62247 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
Sox16Q62247 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC9.09□□□□□ -0.95
Sox16Q62247 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Sox16Q62247 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC9.09□□□□□ -0.95
Sox16Q62247 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Sox16Q62247 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC9.09□□□□□ -0.95
Sox16Q62247 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Gm45779-201ENSMUST00000212189 4064 ntBASIC9.09□□□□□ -0.95
Sox16Q62247 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sox16Q62247 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Sox16Q62247 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.96
Sox16Q62247 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Sox16Q62247 Peli2-204ENSMUST00000226513 1320 ntBASIC9.08□□□□□ -0.96
Sox16Q62247 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Sox16Q62247 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Sox16Q62247 Gm20614-201ENSMUST00000177106 632 ntBASIC9.08□□□□□ -0.96
Sox16Q62247 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Sox16Q62247 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms