Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn9aQ62205 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn9aQ62205 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Scn9aQ62205 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn9aQ62205 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.82■□□□□ 0.6
Scn9aQ62205 Rprl2-201ENSMUST00000157150 290 ntBASIC18.82■□□□□ 0.6
Scn9aQ62205 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.82■□□□□ 0.6
Scn9aQ62205 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.82■□□□□ 0.6
Scn9aQ62205 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.82■□□□□ 0.6
Scn9aQ62205 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.82■□□□□ 0.6
Scn9aQ62205 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn9aQ62205 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn9aQ62205 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn9aQ62205 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.82■□□□□ 0.6
Scn9aQ62205 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.82■□□□□ 0.6
Scn9aQ62205 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.82■□□□□ 0.6
Scn9aQ62205 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn9aQ62205 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Scn9aQ62205 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn9aQ62205 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn9aQ62205 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Mir449b-201ENSMUST00000104833 80 ntBASIC18.81■□□□□ 0.6
Scn9aQ62205 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.81■□□□□ 0.6
Scn9aQ62205 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.81■□□□□ 0.6
Scn9aQ62205 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Scn9aQ62205 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.81■□□□□ 0.6
Scn9aQ62205 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Scn9aQ62205 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.81■□□□□ 0.6
Scn9aQ62205 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Scn9aQ62205 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn9aQ62205 Gm20553-201ENSMUST00000204205 844 ntBASIC18.81■□□□□ 0.6
Scn9aQ62205 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.81■□□□□ 0.6
Scn9aQ62205 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Scn9aQ62205 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.8■□□□□ 0.6
Scn9aQ62205 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.8■□□□□ 0.6
Scn9aQ62205 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn9aQ62205 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn9aQ62205 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn9aQ62205 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Scn9aQ62205 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn9aQ62205 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn9aQ62205 Gm11424-201ENSMUST00000121929 829 ntBASIC18.8■□□□□ 0.6
Scn9aQ62205 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.8■□□□□ 0.6
Scn9aQ62205 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.8■□□□□ 0.6
Scn9aQ62205 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.8■□□□□ 0.6
Scn9aQ62205 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Scn9aQ62205 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Scn9aQ62205 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Scn9aQ62205 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn9aQ62205 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn9aQ62205 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn9aQ62205 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn9aQ62205 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn9aQ62205 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn9aQ62205 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn9aQ62205 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Scn9aQ62205 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Scn9aQ62205 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.79■□□□□ 0.6
Scn9aQ62205 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn9aQ62205 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn9aQ62205 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scn9aQ62205 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn9aQ62205 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn9aQ62205 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn9aQ62205 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.79■□□□□ 0.6
Scn9aQ62205 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.79■□□□□ 0.6
Scn9aQ62205 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn9aQ62205 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scn9aQ62205 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.79■□□□□ 0.6
Scn9aQ62205 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn9aQ62205 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn9aQ62205 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn9aQ62205 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn9aQ62205 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn9aQ62205 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Scn9aQ62205 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn9aQ62205 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn9aQ62205 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn9aQ62205 Gm6257-201ENSMUST00000163864 910 ntBASIC18.78■□□□□ 0.6
Scn9aQ62205 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.78■□□□□ 0.6
Scn9aQ62205 Thap2-203ENSMUST00000218989 527 ntBASIC18.78■□□□□ 0.6
Scn9aQ62205 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.78■□□□□ 0.6
Scn9aQ62205 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn9aQ62205 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Scn9aQ62205 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn9aQ62205 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn9aQ62205 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.78■□□□□ 0.6
Scn9aQ62205 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms