Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Foxc1Q61572 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Foxc1Q61572 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.84□□□□□ -0.51
Foxc1Q61572 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Foxc1Q61572 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.84□□□□□ -0.51
Foxc1Q61572 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.84□□□□□ -0.51
Foxc1Q61572 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.84□□□□□ -0.51
Foxc1Q61572 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Foxc1Q61572 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.84□□□□□ -0.51
Foxc1Q61572 Gm25116-201ENSMUST00000157191 122 ntBASIC11.84□□□□□ -0.51
Foxc1Q61572 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.84□□□□□ -0.51
Foxc1Q61572 Gm29518-201ENSMUST00000190858 372 ntBASIC11.84□□□□□ -0.51
Foxc1Q61572 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.84□□□□□ -0.51
Foxc1Q61572 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.84□□□□□ -0.51
Foxc1Q61572 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Foxc1Q61572 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Foxc1Q61572 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxc1Q61572 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Foxc1Q61572 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Foxc1Q61572 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Foxc1Q61572 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.83□□□□□ -0.52
Foxc1Q61572 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.83□□□□□ -0.52
Foxc1Q61572 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.83□□□□□ -0.52
Foxc1Q61572 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Foxc1Q61572 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxc1Q61572 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Foxc1Q61572 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.82□□□□□ -0.52
Foxc1Q61572 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.82□□□□□ -0.52
Foxc1Q61572 Gm29707-201ENSMUST00000196325 491 ntBASIC11.82□□□□□ -0.52
Foxc1Q61572 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.82□□□□□ -0.52
Foxc1Q61572 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Foxc1Q61572 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Foxc1Q61572 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.82□□□□□ -0.52
Foxc1Q61572 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.82□□□□□ -0.52
Foxc1Q61572 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Foxc1Q61572 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxc1Q61572 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Foxc1Q61572 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Foxc1Q61572 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Foxc1Q61572 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxc1Q61572 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxc1Q61572 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Foxc1Q61572 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms