Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Gm33142-201ENSMUST00000193913 867 ntBASIC14.85□□□□□ -0.03
Clcn4Q61418 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.85□□□□□ -0.03
Clcn4Q61418 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.85□□□□□ -0.03
Clcn4Q61418 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Clcn4Q61418 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Clcn4Q61418 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.84□□□□□ -0.03
Clcn4Q61418 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Clcn4Q61418 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.84□□□□□ -0.03
Clcn4Q61418 Gm14859-201ENSMUST00000117752 357 ntBASIC14.84□□□□□ -0.03
Clcn4Q61418 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.84□□□□□ -0.03
Clcn4Q61418 Gm6345-202ENSMUST00000180900 204 ntBASIC14.84□□□□□ -0.03
Clcn4Q61418 Gm27389-201ENSMUST00000183622 195 ntBASIC14.84□□□□□ -0.03
Clcn4Q61418 Gm7370-201ENSMUST00000219471 767 ntBASIC14.84□□□□□ -0.03
Clcn4Q61418 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Clcn4Q61418 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.84□□□□□ -0.03
Clcn4Q61418 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.84□□□□□ -0.03
Clcn4Q61418 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Clcn4Q61418 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Clcn4Q61418 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Clcn4Q61418 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clcn4Q61418 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clcn4Q61418 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clcn4Q61418 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clcn4Q61418 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clcn4Q61418 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Clcn4Q61418 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Gm10819-201ENSMUST00000099988 561 ntBASIC14.83□□□□□ -0.04
Clcn4Q61418 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.83□□□□□ -0.04
Clcn4Q61418 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Clcn4Q61418 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Clcn4Q61418 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clcn4Q61418 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.82□□□□□ -0.04
Clcn4Q61418 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Clcn4Q61418 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Clcn4Q61418 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.82□□□□□ -0.04
Clcn4Q61418 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.82□□□□□ -0.04
Clcn4Q61418 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clcn4Q61418 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms