Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.92■□□□□ 0.46
Col11a1Q61245 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Col11a1Q61245 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.92■□□□□ 0.46
Col11a1Q61245 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col11a1Q61245 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col11a1Q61245 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col11a1Q61245 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col11a1Q61245 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col11a1Q61245 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col11a1Q61245 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col11a1Q61245 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col11a1Q61245 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col11a1Q61245 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col11a1Q61245 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.91■□□□□ 0.46
Col11a1Q61245 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col11a1Q61245 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col11a1Q61245 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.91■□□□□ 0.46
Col11a1Q61245 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col11a1Q61245 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col11a1Q61245 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col11a1Q61245 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.91■□□□□ 0.46
Col11a1Q61245 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.91■□□□□ 0.46
Col11a1Q61245 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Col11a1Q61245 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.91■□□□□ 0.46
Col11a1Q61245 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.91■□□□□ 0.46
Col11a1Q61245 Gm43767-201ENSMUST00000198933 381 ntBASIC17.91■□□□□ 0.46
Col11a1Q61245 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.91■□□□□ 0.46
Col11a1Q61245 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Col11a1Q61245 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.9■□□□□ 0.46
Col11a1Q61245 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.9■□□□□ 0.46
Col11a1Q61245 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Col11a1Q61245 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Col11a1Q61245 Mir6977-201ENSMUST00000184960 64 ntBASIC17.9■□□□□ 0.46
Col11a1Q61245 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.9■□□□□ 0.46
Col11a1Q61245 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Col11a1Q61245 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.9■□□□□ 0.46
Col11a1Q61245 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col11a1Q61245 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.9■□□□□ 0.46
Col11a1Q61245 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.9■□□□□ 0.46
Col11a1Q61245 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col11a1Q61245 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Col11a1Q61245 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Col11a1Q61245 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Col11a1Q61245 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.89■□□□□ 0.45
Col11a1Q61245 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Col11a1Q61245 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.89■□□□□ 0.45
Col11a1Q61245 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.89■□□□□ 0.45
Col11a1Q61245 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Col11a1Q61245 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Col11a1Q61245 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Col11a1Q61245 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Col11a1Q61245 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Col11a1Q61245 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col11a1Q61245 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Col11a1Q61245 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.88■□□□□ 0.45
Col11a1Q61245 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.88■□□□□ 0.45
Col11a1Q61245 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.88■□□□□ 0.45
Col11a1Q61245 Gm2423-201ENSMUST00000074863 733 ntBASIC17.88■□□□□ 0.45
Col11a1Q61245 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col11a1Q61245 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col11a1Q61245 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms