Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav2Q5R1I9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav2Q5R1I9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav2Q5R1I9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav2Q5R1I9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav2Q5R1I9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav2Q5R1I9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Dancr-204ENSMUST00000132389 2347 ntBASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav2Q5R1I9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Gm13884-201ENSMUST00000118103 829 ntBASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Rps4l-201ENSMUST00000071745 943 ntBASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav2Q5R1I9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Gm18195-201ENSMUST00000207604 706 ntBASIC12.81□□□□□ -0.36
Trav2Q5R1I9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav2Q5R1I9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms