Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv4Q5R1A3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.31□□□□□ -0.28
Trdv4Q5R1A3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv4Q5R1A3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trdv4Q5R1A3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv4Q5R1A3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.3□□□□□ -0.28
Trdv4Q5R1A3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Gm13836-201ENSMUST00000121159 501 ntBASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv4Q5R1A3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Gm6623-201ENSMUST00000173570 544 ntBASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv4Q5R1A3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdv4Q5R1A3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdv4Q5R1A3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trdv4Q5R1A3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdv4Q5R1A3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv4Q5R1A3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trdv4Q5R1A3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv4Q5R1A3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms