Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim63Q38HM4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Gm29791-202ENSMUST00000207888 369 ntBASIC13.34□□□□□ -0.27
Trim63Q38HM4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.34□□□□□ -0.27
Trim63Q38HM4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim63Q38HM4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim63Q38HM4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim63Q38HM4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trim63Q38HM4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim63Q38HM4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim63Q38HM4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim63Q38HM4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.33□□□□□ -0.28
Trim63Q38HM4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim63Q38HM4 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.32□□□□□ -0.28
Trim63Q38HM4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim63Q38HM4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.32□□□□□ -0.28
Trim63Q38HM4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim63Q38HM4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.32□□□□□ -0.28
Trim63Q38HM4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trim63Q38HM4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms