Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SgcbP82349 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.34□□□□□ -0.11
SgcbP82349 Gm28033-201ENSMUST00000184224 96 ntBASIC14.34□□□□□ -0.11
SgcbP82349 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.34□□□□□ -0.11
SgcbP82349 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.34□□□□□ -0.11
SgcbP82349 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.34□□□□□ -0.11
SgcbP82349 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.34□□□□□ -0.11
SgcbP82349 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcbP82349 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.34□□□□□ -0.11
SgcbP82349 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SgcbP82349 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SgcbP82349 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SgcbP82349 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SgcbP82349 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.33□□□□□ -0.11
SgcbP82349 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SgcbP82349 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcbP82349 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcbP82349 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcbP82349 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcbP82349 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.33□□□□□ -0.12
SgcbP82349 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SgcbP82349 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.33□□□□□ -0.12
SgcbP82349 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.33□□□□□ -0.12
SgcbP82349 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcbP82349 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SgcbP82349 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcbP82349 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.33□□□□□ -0.12
SgcbP82349 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcbP82349 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcbP82349 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SgcbP82349 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SgcbP82349 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SgcbP82349 Gm12895-201ENSMUST00000122214 226 ntBASIC14.32□□□□□ -0.12
SgcbP82349 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.32□□□□□ -0.12
SgcbP82349 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.32□□□□□ -0.12
SgcbP82349 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.32□□□□□ -0.12
SgcbP82349 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.32□□□□□ -0.12
SgcbP82349 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
SgcbP82349 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.32□□□□□ -0.12
SgcbP82349 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcbP82349 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SgcbP82349 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.31□□□□□ -0.12
SgcbP82349 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.31□□□□□ -0.12
SgcbP82349 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.31□□□□□ -0.12
SgcbP82349 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.31□□□□□ -0.12
SgcbP82349 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.31□□□□□ -0.12
SgcbP82349 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.31□□□□□ -0.12
SgcbP82349 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.31□□□□□ -0.12
SgcbP82349 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.31□□□□□ -0.12
SgcbP82349 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.31□□□□□ -0.12
SgcbP82349 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.31□□□□□ -0.12
SgcbP82349 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcbP82349 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms