Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.41□□□□□ -0.1
Cldn18P56857 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.41□□□□□ -0.1
Cldn18P56857 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cldn18P56857 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.41□□□□□ -0.1
Cldn18P56857 Gm28033-201ENSMUST00000184224 96 ntBASIC14.41□□□□□ -0.1
Cldn18P56857 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.41□□□□□ -0.1
Cldn18P56857 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.41□□□□□ -0.1
Cldn18P56857 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cldn18P56857 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.41□□□□□ -0.1
Cldn18P56857 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn18P56857 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.4□□□□□ -0.1
Cldn18P56857 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cldn18P56857 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.4□□□□□ -0.1
Cldn18P56857 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.4□□□□□ -0.1
Cldn18P56857 Gm12895-201ENSMUST00000122214 226 ntBASIC14.4□□□□□ -0.1
Cldn18P56857 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.4□□□□□ -0.1
Cldn18P56857 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn18P56857 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn18P56857 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn18P56857 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn18P56857 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn18P56857 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn18P56857 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn18P56857 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cldn18P56857 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.39□□□□□ -0.11
Cldn18P56857 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn18P56857 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn18P56857 Gm15372-201ENSMUST00000120729 834 ntBASIC14.39□□□□□ -0.11
Cldn18P56857 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn18P56857 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cldn18P56857 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.39□□□□□ -0.11
Cldn18P56857 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.39□□□□□ -0.11
Cldn18P56857 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.39□□□□□ -0.11
Cldn18P56857 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cldn18P56857 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn18P56857 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.39□□□□□ -0.11
Cldn18P56857 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn18P56857 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.39□□□□□ -0.11
Cldn18P56857 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.39□□□□□ -0.11
Cldn18P56857 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn18P56857 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn18P56857 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.38□□□□□ -0.11
Cldn18P56857 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cldn18P56857 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.38□□□□□ -0.11
Cldn18P56857 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.38□□□□□ -0.11
Cldn18P56857 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.38□□□□□ -0.11
Cldn18P56857 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.38□□□□□ -0.11
Cldn18P56857 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Cldn18P56857 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Cldn18P56857 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cldn18P56857 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cldn18P56857 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms