Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.94■□□□□ 0.14
Atxn1P54254 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.94■□□□□ 0.14
Atxn1P54254 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 Gm13036-201ENSMUST00000117799 748 ntBASIC15.94■□□□□ 0.14
Atxn1P54254 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.94■□□□□ 0.14
Atxn1P54254 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Atxn1P54254 Gm27321-201ENSMUST00000185021 205 ntBASIC15.94■□□□□ 0.14
Atxn1P54254 Gm44450-201ENSMUST00000199528 114 ntBASIC15.94■□□□□ 0.14
Atxn1P54254 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.94■□□□□ 0.14
Atxn1P54254 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Atxn1P54254 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Atxn1P54254 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.94■□□□□ 0.14
Atxn1P54254 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Atxn1P54254 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Atxn1P54254 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.93■□□□□ 0.14
Atxn1P54254 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.93■□□□□ 0.14
Atxn1P54254 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.93■□□□□ 0.14
Atxn1P54254 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Atxn1P54254 Chchd1-203ENSMUST00000224633 557 ntBASIC15.93■□□□□ 0.14
Atxn1P54254 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.93■□□□□ 0.14
Atxn1P54254 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Atxn1P54254 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Atxn1P54254 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.92■□□□□ 0.14
Atxn1P54254 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.92■□□□□ 0.14
Atxn1P54254 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.92■□□□□ 0.14
Atxn1P54254 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.92■□□□□ 0.14
Atxn1P54254 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Atxn1P54254 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.91■□□□□ 0.14
Atxn1P54254 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Atxn1P54254 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Atxn1P54254 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Atxn1P54254 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.91■□□□□ 0.14
Atxn1P54254 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
Atxn1P54254 Gm7506-201ENSMUST00000207758 815 ntBASIC15.91■□□□□ 0.14
Atxn1P54254 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.91■□□□□ 0.14
Atxn1P54254 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms