Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CcnfP51944 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CcnfP51944 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CcnfP51944 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CcnfP51944 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CcnfP51944 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.33■□□□□ 0.04
CcnfP51944 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CcnfP51944 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CcnfP51944 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.33■□□□□ 0.04
CcnfP51944 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CcnfP51944 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CcnfP51944 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.33■□□□□ 0.04
CcnfP51944 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CcnfP51944 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CcnfP51944 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CcnfP51944 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CcnfP51944 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.32■□□□□ 0.04
CcnfP51944 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.32■□□□□ 0.04
CcnfP51944 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.32■□□□□ 0.04
CcnfP51944 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.32■□□□□ 0.04
CcnfP51944 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.32■□□□□ 0.04
CcnfP51944 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CcnfP51944 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.32■□□□□ 0.04
CcnfP51944 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.32■□□□□ 0.04
CcnfP51944 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.32■□□□□ 0.04
CcnfP51944 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.32■□□□□ 0.04
CcnfP51944 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.32■□□□□ 0.04
CcnfP51944 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.32■□□□□ 0.04
CcnfP51944 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnfP51944 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.31■□□□□ 0.04
CcnfP51944 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Gm11539-201ENSMUST00000119837 557 ntBASIC15.31■□□□□ 0.04
CcnfP51944 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.31■□□□□ 0.04
CcnfP51944 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.31■□□□□ 0.04
CcnfP51944 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.31■□□□□ 0.04
CcnfP51944 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.31■□□□□ 0.04
CcnfP51944 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnfP51944 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
CcnfP51944 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CcnfP51944 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CcnfP51944 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CcnfP51944 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CcnfP51944 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.3■□□□□ 0.04
CcnfP51944 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CcnfP51944 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CcnfP51944 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CcnfP51944 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CcnfP51944 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CcnfP51944 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnfP51944 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CcnfP51944 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnfP51944 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnfP51944 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnfP51944 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CcnfP51944 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms