Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.54■□□□□ 0.24
Cxcl12P40224 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Cxcl12P40224 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cxcl12P40224 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.54■□□□□ 0.24
Cxcl12P40224 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.54■□□□□ 0.24
Cxcl12P40224 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl12P40224 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cxcl12P40224 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cxcl12P40224 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cxcl12P40224 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Cxcl12P40224 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.53■□□□□ 0.24
Cxcl12P40224 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Gm18489-201ENSMUST00000172565 551 ntBASIC16.53■□□□□ 0.24
Cxcl12P40224 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.53■□□□□ 0.24
Cxcl12P40224 Mir6990-201ENSMUST00000183724 91 ntBASIC16.53■□□□□ 0.24
Cxcl12P40224 Gm45747-201ENSMUST00000212203 999 ntBASIC16.53■□□□□ 0.24
Cxcl12P40224 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.53■□□□□ 0.24
Cxcl12P40224 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cxcl12P40224 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cxcl12P40224 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.53■□□□□ 0.24
Cxcl12P40224 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.53■□□□□ 0.24
Cxcl12P40224 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl12P40224 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl12P40224 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl12P40224 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Cxcl12P40224 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.52■□□□□ 0.24
Cxcl12P40224 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl12P40224 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl12P40224 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl12P40224 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.52■□□□□ 0.24
Cxcl12P40224 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl12P40224 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl12P40224 Gm11745-201ENSMUST00000121669 448 ntBASIC16.52■□□□□ 0.24
Cxcl12P40224 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl12P40224 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.52■□□□□ 0.24
Cxcl12P40224 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.52■□□□□ 0.24
Cxcl12P40224 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.52■□□□□ 0.24
Cxcl12P40224 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cxcl12P40224 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl12P40224 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl12P40224 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl12P40224 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Cxcl12P40224 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cxcl12P40224 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Cxcl12P40224 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cxcl12P40224 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Cxcl12P40224 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.51■□□□□ 0.23
Cxcl12P40224 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Cxcl12P40224 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.51■□□□□ 0.23
Cxcl12P40224 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Cxcl12P40224 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Cxcl12P40224 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.51■□□□□ 0.23
Cxcl12P40224 Gm43474-201ENSMUST00000196415 774 ntBASIC16.51■□□□□ 0.23
Cxcl12P40224 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.51■□□□□ 0.23
Cxcl12P40224 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcl12P40224 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cxcl12P40224 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.5■□□□□ 0.23
Cxcl12P40224 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms