Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PrnpP04925 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PrnpP04925 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PrnpP04925 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PrnpP04925 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PrnpP04925 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.65■□□□□ 0.26
PrnpP04925 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PrnpP04925 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PrnpP04925 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.64■□□□□ 0.25
PrnpP04925 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PrnpP04925 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PrnpP04925 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.64■□□□□ 0.25
PrnpP04925 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
PrnpP04925 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PrnpP04925 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PrnpP04925 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PrnpP04925 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.63■□□□□ 0.25
PrnpP04925 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.63■□□□□ 0.25
PrnpP04925 Gm45167-201ENSMUST00000208007 322 ntBASIC16.63■□□□□ 0.25
PrnpP04925 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.63■□□□□ 0.25
PrnpP04925 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.63■□□□□ 0.25
PrnpP04925 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PrnpP04925 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PrnpP04925 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.63■□□□□ 0.25
PrnpP04925 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PrnpP04925 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PrnpP04925 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrnpP04925 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PrnpP04925 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrnpP04925 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PrnpP04925 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrnpP04925 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PrnpP04925 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.62■□□□□ 0.25
PrnpP04925 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.62■□□□□ 0.25
PrnpP04925 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PrnpP04925 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.62■□□□□ 0.25
PrnpP04925 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrnpP04925 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrnpP04925 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PrnpP04925 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrnpP04925 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PrnpP04925 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PrnpP04925 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrnpP04925 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrnpP04925 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PrnpP04925 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PrnpP04925 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrnpP04925 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.61■□□□□ 0.25
PrnpP04925 Gm26308-201ENSMUST00000157768 69 ntBASIC16.61■□□□□ 0.25
PrnpP04925 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PrnpP04925 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PrnpP04925 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrnpP04925 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrnpP04925 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.61■□□□□ 0.25
PrnpP04925 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrnpP04925 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PrnpP04925 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrnpP04925 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrnpP04925 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PrnpP04925 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.6■□□□□ 0.25
PrnpP04925 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PrnpP04925 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PrnpP04925 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PrnpP04925 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms