Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cldn1O88551 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.78□□□□□ -0.2
Cldn1O88551 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cldn1O88551 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cldn1O88551 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.78□□□□□ -0.2
Cldn1O88551 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cldn1O88551 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cldn1O88551 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cldn1O88551 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cldn1O88551 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cldn1O88551 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cldn1O88551 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.77□□□□□ -0.21
Cldn1O88551 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Cldn1O88551 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.77□□□□□ -0.21
Cldn1O88551 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.77□□□□□ -0.21
Cldn1O88551 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cldn1O88551 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cldn1O88551 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.76□□□□□ -0.21
Cldn1O88551 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Cldn1O88551 Gm14140-201ENSMUST00000119999 995 ntBASIC13.76□□□□□ -0.21
Cldn1O88551 Gm4535-201ENSMUST00000182274 558 ntBASIC13.76□□□□□ -0.21
Cldn1O88551 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.76□□□□□ -0.21
Cldn1O88551 Gm44430-201ENSMUST00000203376 995 ntBASIC13.76□□□□□ -0.21
Cldn1O88551 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.76□□□□□ -0.21
Cldn1O88551 Gm7506-201ENSMUST00000207758 815 ntBASIC13.76□□□□□ -0.21
Cldn1O88551 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Gm10355-201ENSMUST00000097146 517 ntBASIC13.76□□□□□ -0.21
Cldn1O88551 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cldn1O88551 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.76□□□□□ -0.21
Cldn1O88551 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Cldn1O88551 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cldn1O88551 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cldn1O88551 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cldn1O88551 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.75□□□□□ -0.21
Cldn1O88551 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.75□□□□□ -0.21
Cldn1O88551 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.75□□□□□ -0.21
Cldn1O88551 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.75□□□□□ -0.21
Cldn1O88551 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cldn1O88551 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms