Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nid2O88322 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Nid2O88322 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nid2O88322 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.83■□□□□ 0.92
Nid2O88322 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Nid2O88322 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nid2O88322 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Gm43125-201ENSMUST00000201724 730 ntBASIC20.82■□□□□ 0.92
Nid2O88322 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Nid2O88322 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nid2O88322 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nid2O88322 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nid2O88322 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nid2O88322 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nid2O88322 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nid2O88322 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nid2O88322 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nid2O88322 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nid2O88322 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC20.81■□□□□ 0.92
Nid2O88322 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nid2O88322 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nid2O88322 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nid2O88322 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nid2O88322 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nid2O88322 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.81■□□□□ 0.92
Nid2O88322 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nid2O88322 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Nid2O88322 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Nid2O88322 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nid2O88322 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nid2O88322 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC20.8■□□□□ 0.92
Nid2O88322 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nid2O88322 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nid2O88322 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nid2O88322 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nid2O88322 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nid2O88322 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nid2O88322 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.8■□□□□ 0.92
Nid2O88322 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nid2O88322 Gm13216-201ENSMUST00000117145 591 ntBASIC20.79■□□□□ 0.92
Nid2O88322 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC20.79■□□□□ 0.92
Nid2O88322 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC20.79■□□□□ 0.92
Nid2O88322 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC20.79■□□□□ 0.92
Nid2O88322 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Nid2O88322 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nid2O88322 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nid2O88322 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nid2O88322 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nid2O88322 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nid2O88322 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nid2O88322 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nid2O88322 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nid2O88322 Gm18889-201ENSMUST00000174284 929 ntBASIC20.78■□□□□ 0.92
Nid2O88322 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nid2O88322 Gm20553-201ENSMUST00000204205 844 ntBASIC20.78■□□□□ 0.92
Nid2O88322 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nid2O88322 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Nid2O88322 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nid2O88322 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nid2O88322 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.78■□□□□ 0.92
Nid2O88322 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nid2O88322 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Nid2O88322 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nid2O88322 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC20.78■□□□□ 0.92
Nid2O88322 Gm5628-201ENSMUST00000222318 1049 ntBASIC20.78■□□□□ 0.92
Nid2O88322 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Nid2O88322 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nid2O88322 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nid2O88322 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Nid2O88322 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nid2O88322 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nid2O88322 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.77■□□□□ 0.92
Nid2O88322 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nid2O88322 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nid2O88322 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nid2O88322 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.91
Nid2O88322 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.77■□□□□ 0.91
Nid2O88322 Rprl2-201ENSMUST00000157150 290 ntBASIC20.77■□□□□ 0.91
Nid2O88322 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
Nid2O88322 AC131187.1-201ENSMUST00000224567 809 ntBASIC20.77■□□□□ 0.91
Nid2O88322 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nid2O88322 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Nid2O88322 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nid2O88322 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nid2O88322 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nid2O88322 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nid2O88322 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms