Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp9aO70228 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp9aO70228 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atp9aO70228 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.78■□□□□ 0.44
Atp9aO70228 Gm43514-201ENSMUST00000198852 424 ntBASIC17.78■□□□□ 0.44
Atp9aO70228 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.78■□□□□ 0.44
Atp9aO70228 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atp9aO70228 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Atp9aO70228 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp9aO70228 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp9aO70228 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp9aO70228 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp9aO70228 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atp9aO70228 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp9aO70228 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Atp9aO70228 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 Gm6089-201ENSMUST00000197666 938 ntBASIC17.77■□□□□ 0.44
Atp9aO70228 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp9aO70228 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
Atp9aO70228 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.77■□□□□ 0.44
Atp9aO70228 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atp9aO70228 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Atp9aO70228 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Atp9aO70228 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.77■□□□□ 0.43
Atp9aO70228 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atp9aO70228 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.77■□□□□ 0.43
Atp9aO70228 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Atp9aO70228 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Atp9aO70228 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.76■□□□□ 0.43
Atp9aO70228 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.76■□□□□ 0.43
Atp9aO70228 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.76■□□□□ 0.43
Atp9aO70228 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Gm7230-201ENSMUST00000173026 815 ntBASIC17.76■□□□□ 0.43
Atp9aO70228 Gm27525-201ENSMUST00000184465 107 ntBASIC17.76■□□□□ 0.43
Atp9aO70228 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.76■□□□□ 0.43
Atp9aO70228 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Atp9aO70228 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atp9aO70228 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp9aO70228 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp9aO70228 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp9aO70228 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.75■□□□□ 0.43
Atp9aO70228 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.75■□□□□ 0.43
Atp9aO70228 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp9aO70228 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.75■□□□□ 0.43
Atp9aO70228 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp9aO70228 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atp9aO70228 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atp9aO70228 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atp9aO70228 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Atp9aO70228 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Atp9aO70228 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp9aO70228 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.74■□□□□ 0.43
Atp9aO70228 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.74■□□□□ 0.43
Atp9aO70228 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp9aO70228 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atp9aO70228 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Atp9aO70228 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp9aO70228 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp9aO70228 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atp9aO70228 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp9aO70228 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.74■□□□□ 0.43
Atp9aO70228 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.74■□□□□ 0.43
Atp9aO70228 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.74■□□□□ 0.43
Atp9aO70228 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.74■□□□□ 0.43
Atp9aO70228 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.74■□□□□ 0.43
Atp9aO70228 Gm15173-201ENSMUST00000122049 433 ntBASIC17.74■□□□□ 0.43
Atp9aO70228 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atp9aO70228 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.74■□□□□ 0.43
Atp9aO70228 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.74■□□□□ 0.43
Atp9aO70228 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.74■□□□□ 0.43
Atp9aO70228 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms