Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.34□□□□□ -0.27
SncaO55042 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SncaO55042 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.34□□□□□ -0.27
SncaO55042 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.34□□□□□ -0.27
SncaO55042 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.34□□□□□ -0.27
SncaO55042 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SncaO55042 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.34□□□□□ -0.27
SncaO55042 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SncaO55042 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SncaO55042 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SncaO55042 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SncaO55042 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SncaO55042 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
SncaO55042 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SncaO55042 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SncaO55042 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
SncaO55042 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Gm18115-201ENSMUST00000221209 621 ntBASIC13.33□□□□□ -0.28
SncaO55042 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
SncaO55042 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SncaO55042 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.32□□□□□ -0.28
SncaO55042 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.32□□□□□ -0.28
SncaO55042 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SncaO55042 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SncaO55042 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SncaO55042 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SncaO55042 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.32□□□□□ -0.28
SncaO55042 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.32□□□□□ -0.28
SncaO55042 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Phf7-203ENSMUST00000226565 1971 ntBASIC13.32□□□□□ -0.28
SncaO55042 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.32□□□□□ -0.28
SncaO55042 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
SncaO55042 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SncaO55042 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SncaO55042 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.31□□□□□ -0.28
SncaO55042 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SncaO55042 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.31□□□□□ -0.28
SncaO55042 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms