Protein–RNA interactions for Protein: F6UCX4

Sptbn5, Spectrin beta, non-erythrocytic 5 (Fragment), mousemouse

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn5F6UCX4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.32■□□□□ 0.68
Sptbn5F6UCX4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sptbn5F6UCX4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptbn5F6UCX4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.32■□□□□ 0.68
Sptbn5F6UCX4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sptbn5F6UCX4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Sptbn5F6UCX4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptbn5F6UCX4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptbn5F6UCX4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sptbn5F6UCX4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptbn5F6UCX4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sptbn5F6UCX4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sptbn5F6UCX4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sptbn5F6UCX4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sptbn5F6UCX4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sptbn5F6UCX4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Gm10653-202ENSMUST00000139570 835 ntBASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Gm20760-201ENSMUST00000179197 648 ntBASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Timm23-208ENSMUST00000226683 750 ntBASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sptbn5F6UCX4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms