Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.67■□□□□ 0.1
Gm28729A0A1B0GSW2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Gm28729A0A1B0GSW2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Gm28729A0A1B0GSW2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28729A0A1B0GSW2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Gm23935-201ENSMUST00000102303 57 ntBASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Gm24270-201ENSMUST00000102326 57 ntBASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Gm24245-201ENSMUST00000157318 57 ntBASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Gm25911-201ENSMUST00000157621 56 ntBASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.63■□□□□ 0.09
Gm28729A0A1B0GSW2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms