Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Timm23-208ENSMUST00000226683 750 ntBASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm15039-201ENSMUST00000118914 875 ntBASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm10653-202ENSMUST00000139570 835 ntBASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms