Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Gm9959-201ENSMUST00000068277 390 ntBASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Gm12922-201ENSMUST00000120626 809 ntBASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Gm29791-202ENSMUST00000207888 369 ntBASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tcrg-V4A0A0B4J1J8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms