Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trbv13-3A0A0B4J1H2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Actl10-202ENSMUST00000226583 1501 ntBASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm10517-202ENSMUST00000192970 758 ntBASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 AV356131-201ENSMUST00000206201 750 ntBASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gm18025-201ENSMUST00000221733 862 ntBASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv13-3A0A0B4J1H2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms