Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.48□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Gm37055-201ENSMUST00000191866 133 ntBASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ighv1-49A0A0A6YWX2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Gm13186-201ENSMUST00000118031 316 ntBASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Gm11539-201ENSMUST00000119837 557 ntBASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ighv1-49A0A0A6YWX2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Phf7-203ENSMUST00000226565 1971 ntBASIC11.46□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Gm18115-201ENSMUST00000221209 621 ntBASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ighv1-49A0A0A6YWX2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms