Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Gm10566-201ENSMUST00000086739 996 ntBASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.48□□□□□ -0.25
Trav5-4A0A075B652 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Mir5130-201ENSMUST00000175160 84 ntBASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Gm44450-201ENSMUST00000199528 114 ntBASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-4A0A075B652 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Gm11336-201ENSMUST00000118168 334 ntBASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Gm7889-201ENSMUST00000185591 958 ntBASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-4A0A075B652 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trav5-4A0A075B652 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-4A0A075B652 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-4A0A075B652 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-4A0A075B652 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-4A0A075B652 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-4A0A075B652 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-4A0A075B652 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-4A0A075B652 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-4A0A075B652 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-4A0A075B652 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav5-4A0A075B652 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-4A0A075B652 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav5-4A0A075B652 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms