Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Timm23-208ENSMUST00000226683 750 ntBASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Mir1199-201ENSMUST00000117015 119 ntBASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Gm18115-201ENSMUST00000221209 621 ntBASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms