Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16d-dv11A0A075B617 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm17661-201ENSMUST00000170317 270 ntBASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16d-dv11A0A075B617 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm26524-201ENSMUST00000192339 390 ntBASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Rab3c-203ENSMUST00000224180 967 ntBASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav16d-dv11A0A075B617 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm24841-201ENSMUST00000158676 357 ntBASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Gm37025-201ENSMUST00000195159 829 ntBASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav16d-dv11A0A075B617 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms