Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AL442163.3-201ENST00000554110 156 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL158211.1-201ENST00000566763 763 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 MIR4661-201ENST00000582720 75 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC092807.2-201ENST00000609367 243 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 MIR8070-201ENST00000616510 88 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC068792.1-201ENST00000621354 417 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL078596.1-201ENST00000624856 447 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 snoZ196.1-201ENST00000625269 89 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 SCARNA4-201ENST00000629045 128 ntBASIC0.96□□□□□ -2.26
COMMD3-BMI1R4GMX3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 SNORD115-32-201ENST00000364079 82 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 Y_RNA.378-201ENST00000365652 113 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 SNORA69-201ENST00000383895 132 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 MIR499A-201ENST00000384903 122 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 MRPS10P2-201ENST00000431226 381 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC098826.2-201ENST00000452011 651 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU6-221P-201ENST00000459541 99 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 TRBVA-201ENST00000498804 316 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC010424.1-201ENST00000506336 297 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC092436.3-201ENST00000511788 257 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC104576.1-201ENST00000524225 88 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 MTND1P35-201ENST00000526739 508 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC091895.1-201ENST00000624494 256 ntBASIC0.95□□□□□ -2.26
COMMD3-BMI1R4GMX3 Y_RNA.226-201ENST00000364337 114 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU6-1305P-201ENST00000364353 104 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU6-1240P-201ENST00000365155 104 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 SNORA67.2-201ENST00000384300 149 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 MIR549A-201ENST00000385268 96 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 MIR1287-201ENST00000408492 90 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU6-648P-201ENST00000410190 107 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU6-325P-201ENST00000411132 105 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 MTCO2P16-201ENST00000436962 677 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 MTCO1P19-201ENST00000443487 500 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 AF186996.7-201ENST00000492781 209 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC010486.3-201ENST00000511602 785 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU1-142P-201ENST00000516682 145 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC026371.1-201ENST00000551867 419 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL118558.2-201ENST00000556294 238 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 SNORD11B-201ENST00000607707 90 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC245008.1-201ENST00000608123 476 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL133215.3-201ENST00000609801 448 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL021879.1-201ENST00000611756 288 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL359075.3-201ENST00000613288 217 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.94□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU6-1085P-201ENST00000363576 107 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 SNORA33-201ENST00000363664 130 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU4-9P-201ENST00000364951 139 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNA5SP323-201ENST00000391094 133 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 RN7SKP200-201ENST00000410564 320 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 POLR2J4-204ENST00000418424 324 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 MTND3P16-201ENST00000452205 344 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 SRRM1P2-201ENST00000464531 1192 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 RPL23AP75-201ENST00000491601 451 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 HMGN1P7-201ENST00000491722 313 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU6-835P-201ENST00000516974 104 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC025647.1-201ENST00000517879 253 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC119751.7-201ENST00000600494 245 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC146944.4-201ENST00000602697 718 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 SNORD114-21-201ENST00000606412 72 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL121757.2-201ENST00000611223 313 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC006001.4-201ENST00000622243 395 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC090582.1-201ENST00000636321 199 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC068647.2-201ENST00000637380 353 ntBASIC0.93□□□□□ -2.26
COMMD3-BMI1R4GMX3 Y_RNA.231-201ENST00000364358 102 ntBASIC0.92□□□□□ -2.26
COMMD3-BMI1R4GMX3 Y_RNA.287-201ENST00000364853 94 ntBASIC0.92□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU6-417P-201ENST00000384712 107 ntBASIC0.92□□□□□ -2.26
COMMD3-BMI1R4GMX3 MIR521-1-201ENST00000384902 87 ntBASIC0.92□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU11-5P-201ENST00000391216 129 ntBASIC0.92□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC004866.1-201ENST00000411748 78 ntBASIC0.92□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.92□□□□□ -2.26
COMMD3-BMI1R4GMX3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.92□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.92□□□□□ -2.26
COMMD3-BMI1R4GMX3 AC004584.2-201ENST00000570407 410 ntBASIC0.92□□□□□ -2.26
COMMD3-BMI1R4GMX3 MIR4742-201ENST00000581069 85 ntBASIC0.92□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL162424.1-201ENST00000602325 221 ntBASIC0.92□□□□□ -2.26
COMMD3-BMI1R4GMX3 Y_RNA.167-201ENST00000363735 109 ntBASIC0.91□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU1-36P-201ENST00000365130 165 ntBASIC0.91□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU4-20P-201ENST00000365601 151 ntBASIC0.91□□□□□ -2.26
COMMD3-BMI1R4GMX3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL356776.1-201ENST00000406574 447 ntBASIC0.91□□□□□ -2.26
COMMD3-BMI1R4GMX3 RNU6-57P-201ENST00000411348 103 ntBASIC0.91□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.91□□□□□ -2.26
COMMD3-BMI1R4GMX3 ERLEC1P1-201ENST00000433806 578 ntBASIC0.91□□□□□ -2.26
COMMD3-BMI1R4GMX3 NDUFA5P4-201ENST00000436704 385 ntBASIC0.91□□□□□ -2.26
COMMD3-BMI1R4GMX3 DAP3P1-201ENST00000441522 278 ntBASIC0.91□□□□□ -2.26
COMMD3-BMI1R4GMX3 AL353572.1-201ENST00000442490 417 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms