Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 AC010329.5-201ENST00000623497 2174 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 AC010889.1-201ENST00000566193 2666 ntBASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 MIR30E-201ENST00000362104 92 ntBASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 U3.8-201ENST00000363675 217 ntBASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-1210P-201ENST00000363775 107 ntBASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 SNORA72.4-201ENST00000384174 132 ntBASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-750P-201ENST00000390946 107 ntBASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 AL135790.2-201ENST00000437701 267 ntBASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 Y_RNA.797-201ENST00000515977 94 ntBASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 RNA5SP367-201ENST00000516557 118 ntBASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 ELOCP29-201ENST00000588193 334 ntBASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 AC008873.1-201ENST00000625051 138 ntBASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HCFC2Q9Y5Z7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 SNORD114-7-201ENST00000362520 77 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 RNA5SP295-201ENST00000362655 121 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-1290P-201ENST00000362957 109 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-899P-201ENST00000363947 107 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 AP002088.1-201ENST00000382740 395 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 Y_RNA.456-201ENST00000384232 111 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 SNORA67.2-201ENST00000384300 149 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 SNORA8.3-201ENST00000384679 139 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 MIR569-201ENST00000385228 96 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-578P-201ENST00000390980 103 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-1154P-201ENST00000391001 104 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 SNORA26.5-201ENST00000391215 123 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 MIR1261-201ENST00000408659 82 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 Y_RNA.629-201ENST00000411368 105 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 AL365496.1-201ENST00000426885 215 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-107P-201ENST00000516643 102 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 DEFB131C-201ENST00000528817 165 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 AC021269.2-201ENST00000532318 330 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 MIR548X2-201ENST00000579776 100 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 AC244205.2-202ENST00000635781 342 ntBASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HCFC2Q9Y5Z7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 AC007256.1-201ENST00000392253 2765 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 Y_RNA.81-201ENST00000362997 102 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-198P-201ENST00000384258 104 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 MIR591-201ENST00000385290 95 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 MIR526A2-201ENST00000390198 65 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 AP000567.1-201ENST00000406413 156 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-735P-201ENST00000410612 107 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 AC027124.2-201ENST00000428249 105 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 AL121890.1-201ENST00000435457 205 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 AC074290.1-201ENST00000448883 135 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 AC010099.1-201ENST00000455434 375 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 AC146507.2-201ENST00000460608 476 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 AC021205.2-201ENST00000480069 347 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 AC107027.2-201ENST00000512197 115 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 RN7SKP132-201ENST00000516001 208 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 MIR5006-201ENST00000583027 110 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.22□□□□□ -1.89
HCFC2Q9Y5Z7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
HCFC2Q9Y5Z7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
HCFC2Q9Y5Z7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.21□□□□□ -1.89
HCFC2Q9Y5Z7 AL136360.1-201ENST00000503377 1900 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 RNU6-655P-201ENST00000362858 107 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 RNU6-151P-201ENST00000364158 107 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 RNU1-57P-201ENST00000384491 166 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 SNORA22C-201ENST00000384614 134 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 MIR147B-201ENST00000390185 80 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 RNU6-257P-201ENST00000410238 98 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 HMGN2P20-201ENST00000437531 273 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 AC105272.1-201ENST00000438604 198 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 AC008267.6-201ENST00000441664 139 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 AC145146.1-201ENST00000496370 254 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 RNU6-426P-201ENST00000516464 97 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 MIR4319-201ENST00000577285 85 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 MIR3186-201ENST00000577404 85 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 AC069294.1-201ENST00000608397 350 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 AL391903.3-201ENST00000612158 163 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 AC069528.2-201ENST00000624849 1991 ntBASIC3.21□□□□□ -1.9
HCFC2Q9Y5Z7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms