Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 MIR329-1-201ENST00000385028 80 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 MIR95-201ENST00000385072 81 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 SNORA12-201ENST00000391162 147 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 AL023284.1-201ENST00000403956 276 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 MIR548F4-201ENST00000408515 105 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 RN7SKP284-201ENST00000411002 343 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 AC004866.1-201ENST00000411748 78 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 AL358176.2-201ENST00000425769 204 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 IPO7P1-201ENST00000442031 636 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 RNU6-1198P-201ENST00000516904 67 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 RNA5SP54-201ENST00000516951 92 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 AC022616.4-201ENST00000522985 181 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 AL138963.2-201ENST00000605137 226 ntBASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SNX9Q9Y5X1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 MIRLET7G-201ENST00000362280 84 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 Y_RNA.133-201ENST00000363428 110 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 U3.9-201ENST00000363823 204 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 RNU6-944P-201ENST00000364023 107 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 Y_RNA.389-201ENST00000383924 113 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 RNU6-1145P-201ENST00000384246 107 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 SNORA67.3-201ENST00000384366 140 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 RNY3P4-201ENST00000384428 101 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 SNORA48.3-201ENST00000391081 134 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 MIR1252-201ENST00000408861 65 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 AL445305.1-201ENST00000432577 575 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 MTND5P22-201ENST00000458380 195 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 Y_RNA.721-201ENST00000517207 102 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 AC022868.1-201ENST00000517767 391 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 AC124312.5-201ENST00000604451 268 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 ZNF204P-201ENST00000416749 2397 ntBASIC2.29□□□□□ -2.04
SNX9Q9Y5X1 Y_RNA.27-201ENST00000362540 103 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 RNA5SP361-201ENST00000362686 118 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 RNU6-873P-201ENST00000363833 107 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 RNA5SP240-201ENST00000365355 128 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 Y_RNA.424-201ENST00000384063 103 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 RNU1-148P-201ENST00000384472 162 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 RNU6-541P-201ENST00000384709 110 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 RNU6-1105P-201ENST00000384774 107 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 AL355497.1-201ENST00000406262 551 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 RNA5SP270-201ENST00000411361 118 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 MTCO3P19-201ENST00000415864 321 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 RNU6-1012P-201ENST00000516606 109 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 Y_RNA.715-201ENST00000517082 110 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 MIR3124-201ENST00000582636 67 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 AL021879.1-201ENST00000611756 288 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 AC005296.1-201ENST00000616145 209 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 MIR5739-201ENST00000619803 80 ntBASIC2.28□□□□□ -2.04
SNX9Q9Y5X1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 Y_RNA.458-201ENST00000384240 102 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 Y_RNA.551-201ENST00000384661 102 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 MIR29B2-201ENST00000385055 81 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 Y_RNA.597-201ENST00000410463 100 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 RNU6-130P-201ENST00000411112 103 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 RNU6-1001P-201ENST00000411265 100 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 MTCO3P8-201ENST00000453691 755 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 AC010655.3-201ENST00000478818 450 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 RNU7-193P-201ENST00000516723 65 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 AL117187.1-201ENST00000555482 181 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 MIR5695-201ENST00000579717 85 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 U6.92-201ENST00000636464 89 ntBASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SNX9Q9Y5X1 Y_RNA.380-201ENST00000365663 111 ntBASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 RNU6-26P-201ENST00000383985 107 ntBASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 Y_RNA.459-201ENST00000384251 102 ntBASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 RNU6-101P-201ENST00000410323 104 ntBASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 FCF1P4-201ENST00000448326 183 ntBASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 CYP2C59P-201ENST00000457790 269 ntBASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 MTATP8P1-201ENST00000467115 207 ntBASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 RN7SKP49-201ENST00000516675 260 ntBASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 AC034114.1-201ENST00000520293 285 ntBASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 AC018630.3-201ENST00000542637 96 ntBASIC2.26□□□□□ -2.05
SNX9Q9Y5X1 AC093023.1-201ENST00000547375 507 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms