Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CKS1BP2-201ENST00000497342 240 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 AC097462.1-201ENST00000514125 324 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 RNU6-965P-201ENST00000516721 96 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 SCARNA3-201ENST00000517097 143 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 CYCSP26-201ENST00000534107 320 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 MTND5P34-201ENST00000568888 325 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR5047-201ENST00000579212 100 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR4662B-201ENST00000579498 81 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR6867-201ENST00000610636 67 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR3914-2-201ENST00000637339 95 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 AL391516.1-201ENST00000554380 2449 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 AC103988.1-201ENST00000566382 2177 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 U8.1-201ENST00000362843 134 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 Y_RNA.634-201ENST00000364811 113 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 Y_RNA.294-201ENST00000364916 102 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 SNORA62-201ENST00000365493 153 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 Y_RNA.525-201ENST00000384570 113 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 RNU6-429P-201ENST00000384582 108 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 RNY4P18-201ENST00000391107 89 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 AC016909.1-201ENST00000415916 166 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 AC009969.1-201ENST00000438726 172 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 CYP2C59P-201ENST00000457790 269 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 RPL21P129-201ENST00000491732 478 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 AC011604.1-201ENST00000545978 196 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 AC133485.4-201ENST00000561835 220 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 AC138907.4-201ENST00000570107 226 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 AC105245.1-201ENST00000581934 244 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 AL020997.2-201ENST00000602607 184 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 AC107294.3-201ENST00000609211 526 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 AC090115.4-201ENST00000609970 188 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR6748-201ENST00000610433 71 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 JPX_2.1-201ENST00000614161 69 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR6129-201ENST00000616087 109 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR1248-201ENST00000629190 106 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 AL353746.1-201ENST00000566293 6881 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 AC080128.1-201ENST00000474389 1917 ntBASIC3.76□□□□□ -1.81
PCDHGA11Q9Y5H2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 Y_RNA.111-201ENST00000363248 100 ntBASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR218-1-201ENST00000384999 110 ntBASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 RNU11-5P-201ENST00000391216 129 ntBASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 RPL21P65-201ENST00000406094 466 ntBASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 RNU2-32P-201ENST00000411193 191 ntBASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 RPS4XP11-201ENST00000446897 772 ntBASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 AC245102.2-201ENST00000448956 180 ntBASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 AC009220.1-201ENST00000451614 275 ntBASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 RNU6-772P-201ENST00000516042 105 ntBASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 Y_RNA.709-201ENST00000516952 92 ntBASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PCDHGA11Q9Y5H2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 RNA5SP97-201ENST00000365006 84 ntBASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR141-201ENST00000384975 95 ntBASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR199A2-201ENST00000385289 110 ntBASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 OR9P1P-201ENST00000496431 281 ntBASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 CYCTP-201ENST00000504253 315 ntBASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 RNU5E-3P-201ENST00000515913 68 ntBASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 AC097639.2-201ENST00000603159 172 ntBASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 Pinc.1-201ENST00000616452 154 ntBASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR6758-201ENST00000620653 63 ntBASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR7515-201ENST00000637837 67 ntBASIC3.74□□□□□ -1.81
PCDHGA11Q9Y5H2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 RNU6-1209P-201ENST00000363655 107 ntBASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 AL603914.1-201ENST00000401964 204 ntBASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 RNA5SP317-201ENST00000410176 116 ntBASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 RNA5SP311-201ENST00000411290 116 ntBASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 AL161788.1-201ENST00000441805 169 ntBASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 RNU6-1146P-201ENST00000516282 102 ntBASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 RNA5SP315-201ENST00000516340 116 ntBASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 RNU6-1061P-201ENST00000516530 99 ntBASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 RNA5SP312-201ENST00000517068 116 ntBASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR3199-1-201ENST00000582434 88 ntBASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR3117-201ENST00000584034 78 ntBASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHGA11Q9Y5H2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms