Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 SNORA72.4-201ENST00000384174 132 ntBASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 MIR29B2-201ENST00000385055 81 ntBASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 SNORA26.5-201ENST00000391215 123 ntBASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 AC146507.2-201ENST00000460608 476 ntBASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 RPL23AP62-201ENST00000463396 453 ntBASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 AL049830.2-201ENST00000480072 201 ntBASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 RN7SKP164-201ENST00000516138 266 ntBASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 MIR548AI-201ENST00000579940 88 ntBASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 snoU2_19.1-201ENST00000362361 80 ntBASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 RNU6-103P-201ENST00000363686 107 ntBASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 RNU6-449P-201ENST00000383914 107 ntBASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 SNORD116-18-201ENST00000383961 92 ntBASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 Y_RNA.400-201ENST00000383963 111 ntBASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 RNU6-1081P-201ENST00000384537 107 ntBASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 RNA5SP229-201ENST00000410809 99 ntBASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 RNA5SP508-201ENST00000411327 119 ntBASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 AC083906.5-201ENST00000503722 328 ntBASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 RN7SKP132-201ENST00000516001 208 ntBASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SIT1Q9Y3P8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 Y_RNA.182-201ENST00000363880 111 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 RNU6-899P-201ENST00000363947 107 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 Y_RNA.310-201ENST00000365063 113 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 RNU6-1130P-201ENST00000365434 107 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 MIR626-201ENST00000385032 94 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 MIR548B-201ENST00000385247 97 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 AL138878.1-201ENST00000405131 347 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 MTATP6P29-201ENST00000415057 132 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 EBAG9P1-201ENST00000418955 543 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 AL031183.1-201ENST00000457667 207 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 SNORA70.12-201ENST00000516084 153 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 SNORA70.14-201ENST00000516205 110 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 HSPE1P18-201ENST00000517602 280 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 MIR4474-201ENST00000579189 78 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 AC099778.2-201ENST00000610904 211 ntBASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SIT1Q9Y3P8 AL159152.1-201ENST00000635019 2587 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 AC134026.1-201ENST00000623249 2239 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 MAPK10-322ENST00000641485 4530 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 AC062016.1-201ENST00000355719 319 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 Y_RNA.357-201ENST00000365487 109 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 SNORA8.3-201ENST00000384679 139 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 MIR767-201ENST00000390228 109 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 SNORA12-201ENST00000391162 147 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 CST9LP2-201ENST00000437612 320 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 EEF1B2P7-201ENST00000451177 676 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 AC108938.1-201ENST00000451204 136 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 RPS20P10-201ENST00000451209 253 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 TRBV12-1-201ENST00000479785 344 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 RNU7-121P-201ENST00000516604 62 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 AC021269.2-201ENST00000532318 330 ntBASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SIT1Q9Y3P8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 SNORA14A-201ENST00000364773 135 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 Y_RNA.343-201ENST00000365354 112 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 MIR526A2-201ENST00000390198 65 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 SNORD67-201ENST00000390833 111 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 RNU6-239P-201ENST00000390990 99 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 MIR1185-2-201ENST00000408687 86 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 AC063976.3-201ENST00000426849 329 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 AL121890.1-201ENST00000435457 205 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 SEPT7P4-201ENST00000437076 306 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 AL109933.2-201ENST00000452651 260 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 SCGB1D5P-201ENST00000515134 247 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 AL360157.1-201ENST00000565962 87 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 MIR4744-201ENST00000581563 82 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 AC008739.2-201ENST00000597006 317 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 AC068700.1-201ENST00000565862 3754 ntBASIC3.11□□□□□ -1.91
SIT1Q9Y3P8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 Y_RNA.341-201ENST00000365341 102 ntBASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 RNU6-851P-201ENST00000384565 107 ntBASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 Y_RNA.568-201ENST00000384742 113 ntBASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 Z98742.2-201ENST00000431564 187 ntBASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 CENPBD1P1-201ENST00000464061 469 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms