Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RNU6-270P-201ENST00000364131 105 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNU4-9P-201ENST00000364951 139 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNU6-926P-201ENST00000384075 107 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNU6-429P-201ENST00000384582 108 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNU6-476P-201ENST00000384726 107 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNU6-882P-201ENST00000391025 103 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNU6-603P-201ENST00000411403 107 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 AC112220.1-201ENST00000434628 355 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 snoU109.2-201ENST00000459316 135 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 snoU13.3-201ENST00000459441 104 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 AC092991.1-201ENST00000477176 376 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 AP004217.1-201ENST00000480579 346 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 AC103975.1-201ENST00000482506 483 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RPL23AP70-201ENST00000483361 460 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNA5SP290-201ENST00000517133 127 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 U7.2-201ENST00000607576 63 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 AP002826.1-201ENST00000608835 315 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 AC118273.1-201ENST00000525324 3006 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 ZNF658B-202ENST00000615961 3375 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNU4-80P-201ENST00000363200 141 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNU6-137P-201ENST00000363680 108 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 Y_RNA.245-201ENST00000364493 95 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNU6-336P-201ENST00000364891 107 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 SNORA72.2-201ENST00000365028 127 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNU6-245P-201ENST00000384020 107 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 SNORA70E-201ENST00000384492 135 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNA5SP425-201ENST00000410336 112 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 EIF1AXP1-201ENST00000419267 435 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 CYCSP49-201ENST00000420810 319 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 AC003982.1-202ENST00000469928 248 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNU6-436P-201ENST00000516171 114 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 RNU6-572P-201ENST00000516724 80 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 AC006199.1-201ENST00000548728 219 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 MIR4716-201ENST00000579628 84 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 MIR5695-201ENST00000579717 85 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 ZNF861P-201ENST00000588126 639 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 AC006254.2-201ENST00000603259 279 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 AC116447.1-201ENST00000613153 453 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 U73479.1-201ENST00000618062 168 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 AC012640.5-201ENST00000623897 319 ntBASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NOTCH3Q9UM47 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
NOTCH3Q9UM47 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
NOTCH3Q9UM47 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RNU6-324P-201ENST00000363957 106 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RNU6-1082P-201ENST00000364574 107 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 SNORD32A-201ENST00000364805 84 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RNU6-728P-201ENST00000365375 104 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 MIR514A1-201ENST00000385133 98 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 SNORA3.2-201ENST00000408221 125 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RNU6-1001P-201ENST00000411265 100 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 BPY2DP-201ENST00000422208 265 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 HMGN2P3-201ENST00000433603 273 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 USP9YP7-201ENST00000436723 430 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 HMGN2P5-201ENST00000436882 273 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 USP9YP32-201ENST00000452432 430 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RNU7-107P-201ENST00000459121 61 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 AC139453.3-201ENST00000493276 369 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 MIR3921-201ENST00000577308 85 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 MIR4498-201ENST00000577599 66 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 AC090115.4-201ENST00000609970 188 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 AL078604.3-201ENST00000615580 211 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 MAPK10-362ENST00000641864 4484 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RNU6-249P-201ENST00000363016 102 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RNU5F-3P-201ENST00000363767 117 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 U8.7-201ENST00000364940 136 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.329-201ENST00000365209 107 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.374-201ENST00000365606 101 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RNU6-211P-201ENST00000384047 107 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RPL21P66-201ENST00000426566 466 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 AL590399.6-201ENST00000446396 307 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RPL39P29-201ENST00000447779 157 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RNU6-191P-201ENST00000516295 94 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RNU6-659P-201ENST00000516454 104 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 RNA5SP380-201ENST00000517190 98 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 AC100767.1-201ENST00000528178 123 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 AC018448.1-201ENST00000552843 316 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 HMGB1P14-201ENST00000557424 591 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 MIR4423-201ENST00000580922 80 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 AL391516.1-201ENST00000554380 2449 ntBASIC2.02□□□□□ -2.09
NOTCH3Q9UM47 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 RNU6-512P-201ENST00000364438 103 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 RNU6-72P-201ENST00000384285 79 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.540-201ENST00000384638 111 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 RNU6-763P-201ENST00000390865 106 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 RPL26P9-201ENST00000457466 433 ntBASIC2.01□□□□□ -2.09
NOTCH3Q9UM47 RNU7-197P-201ENST00000458836 62 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms