Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 AC027176.1-201ENST00000560204 514 ntBASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 AC055872.1-201ENST00000570978 278 ntBASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 AC005176.2-201ENST00000596933 147 ntBASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 AL670379.2-201ENST00000604983 252 ntBASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 AC098479.1-201ENST00000609225 154 ntBASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 AC135776.4-201ENST00000624300 1904 ntBASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
DENND2AQ9ULE3 AC026241.1-201ENST00000517873 2142 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 snoU2_19.1-201ENST00000362361 80 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 RNU4-15P-201ENST00000362613 141 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 Y_RNA.44-201ENST00000362676 108 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 U3.9-201ENST00000363823 204 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 MIR27B-201ENST00000385129 97 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 OOSP1P1-201ENST00000423265 274 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 UQCRBP2-201ENST00000447827 297 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 RPL23AP3-201ENST00000453844 468 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 RNA5SP385-201ENST00000515947 110 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 RNU6-182P-201ENST00000516970 105 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 SNORA81.3-201ENST00000517283 198 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 EIF4A1P12-201ENST00000551910 141 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 AC018448.1-201ENST00000552843 316 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 AC008749.1-201ENST00000597650 306 ntBASIC3.13□□□□□ -1.91
DENND2AQ9ULE3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 Y_RNA.76-201ENST00000362931 109 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 Y_RNA.200-201ENST00000364018 102 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 Y_RNA.297-201ENST00000364950 91 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 Y_RNA.446-201ENST00000384178 104 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 SNORA67.4-201ENST00000384688 142 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 PIGPP3-201ENST00000425307 415 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 EEF1B2P7-201ENST00000451177 676 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 RNU6-625P-201ENST00000459412 107 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 SRIP1-201ENST00000489235 288 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 AC074133.1-201ENST00000515696 183 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 RNA5SP112-201ENST00000515937 99 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 RNA5SP320-201ENST00000516263 124 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 SNORA31.26-201ENST00000517250 137 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 AC026470.2-201ENST00000561492 181 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 MIR4435-1-201ENST00000582552 80 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 AC037487.3-201ENST00000606668 112 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 AC069528.2-201ENST00000624849 1991 ntBASIC3.12□□□□□ -1.91
DENND2AQ9ULE3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 RNU6-727P-201ENST00000363592 107 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 Y_RNA.331-201ENST00000365267 102 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 MIR1298-201ENST00000408783 112 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 RPL19P1-201ENST00000411635 428 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 ELOCP21-201ENST00000412558 336 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 AC104332.2-201ENST00000429959 156 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 HSPE1P18-201ENST00000517602 280 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 AC103810.1-201ENST00000579873 453 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 MIR3945-201ENST00000581853 98 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 U4.3-201ENST00000621047 82 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 AC006001.4-201ENST00000622243 395 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 CTSLP2-204ENST00000629029 392 ntBASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.11□□□□□ -1.91
DENND2AQ9ULE3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 Y_RNA.29-201ENST00000362570 113 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 RNU1-62P-201ENST00000362599 164 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 RNU6-740P-201ENST00000364734 105 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 SNORA72.2-201ENST00000365028 127 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 Y_RNA.498-201ENST00000384460 102 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 SNORA46.1-201ENST00000391069 153 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 AL603908.1-201ENST00000406098 201 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 RN7SKP123-201ENST00000410732 291 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 RPL23AP36-201ENST00000413895 458 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 BMS1P22-201ENST00000414726 313 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 AC009963.1-201ENST00000417265 157 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 EIF4EP4-201ENST00000424916 578 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 RAB28P5-201ENST00000427490 651 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 AC027124.2-201ENST00000428249 105 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 IFNA11P-201ENST00000446352 526 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 PRELID3BP1-201ENST00000457142 540 ntBASIC3.1□□□□□ -1.91
DENND2AQ9ULE3 RN7SL297P-201ENST00000483161 293 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms