Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.26□□□□□ -2.05
SIX4Q9UIU6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.26□□□□□ -2.05
SIX4Q9UIU6 AL390123.1-201ENST00000603216 237 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 RAC1P9-201ENST00000604990 392 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U2.15-201ENST00000611544 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U2.16-201ENST00000613119 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U2.12-201ENST00000613778 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U2.20-201ENST00000613956 192 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U2.9-201ENST00000615427 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U2.11-201ENST00000616345 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U2.2-201ENST00000616535 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U2.3-201ENST00000617785 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U2.19-201ENST00000618602 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 RNU2-1-201ENST00000618664 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U2.6-201ENST00000619225 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U2.5-201ENST00000619465 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U2.10-201ENST00000620268 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 BX322639.1-202ENST00000423987 2213 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.25□□□□□ -2.05
SIX4Q9UIU6 SNORD32B-201ENST00000364460 84 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 SNORA18.2-201ENST00000383865 132 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 MIR29B2-201ENST00000385055 81 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 MIR1252-201ENST00000408861 65 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 Y_RNA.597-201ENST00000410463 100 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 AL139156.1-201ENST00000412785 841 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 AC027124.2-201ENST00000428249 105 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 AL139109.1-201ENST00000455491 297 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 RNU7-26P-201ENST00000458980 63 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 RNU6-397P-201ENST00000516226 104 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 SNORA25.14-201ENST00000516481 132 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 RNU6-1198P-201ENST00000516904 67 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 AC034114.1-201ENST00000520293 285 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 AC131281.1-201ENST00000522984 164 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 IGKV3-31-201ENST00000523109 329 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 AL117187.1-201ENST00000555482 181 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 AC090517.1-201ENST00000569307 266 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 MYL12BP1-201ENST00000569826 507 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 RPS29P30-201ENST00000600975 111 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 AC011476.5-201ENST00000615594 130 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 MIR219B-201ENST00000637023 88 ntBASIC2.25□□□□□ -2.05
SIX4Q9UIU6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.24□□□□□ -2.05
SIX4Q9UIU6 RNU1-76P-201ENST00000362903 159 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 Y_RNA.133-201ENST00000363428 110 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 RNU4-50P-201ENST00000364361 141 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 RNU6-926P-201ENST00000384075 107 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 Y_RNA.471-201ENST00000384312 102 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 Y_RNA.526-201ENST00000384572 110 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 MIR329-1-201ENST00000385028 80 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 RNU6-130P-201ENST00000411112 103 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 MTND3P2-201ENST00000438452 342 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 RPEP5-201ENST00000441137 268 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 AC080013.2-201ENST00000460866 323 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.24□□□□□ -2.05
SIX4Q9UIU6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.24□□□□□ -2.05
SIX4Q9UIU6 MRPS35P2-201ENST00000508242 191 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 RNU6-586P-201ENST00000517265 104 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.24□□□□□ -2.05
SIX4Q9UIU6 MIR4658-201ENST00000584344 65 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 MIR4298-201ENST00000584380 73 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 AL355297.3-201ENST00000604082 446 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 AC245884.12-201ENST00000615364 59 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
SIX4Q9UIU6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SIX4Q9UIU6 RNU6-280P-201ENST00000364145 104 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 Y_RNA.210-201ENST00000364161 110 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 Y_RNA.380-201ENST00000365663 111 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 Y_RNA.551-201ENST00000384661 102 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SIX4Q9UIU6 SDAD1P3-201ENST00000427380 333 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 AL445646.1-201ENST00000431784 216 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.23□□□□□ -2.05
SIX4Q9UIU6 AC091179.3-201ENST00000474761 144 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 MIR449C-201ENST00000516047 92 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 RNU6-1012P-201ENST00000516606 109 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.23□□□□□ -2.05
SIX4Q9UIU6 AL021879.1-201ENST00000611756 288 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 AL357075.2-201ENST00000614906 189 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 AC005562.2-201ENST00000618264 111 ntBASIC2.23□□□□□ -2.05
SIX4Q9UIU6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.23□□□□□ -2.05
SIX4Q9UIU6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
SIX4Q9UIU6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
SIX4Q9UIU6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SIX4Q9UIU6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SIX4Q9UIU6 MIRLET7G-201ENST00000362280 84 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 RNU6-727P-201ENST00000363592 107 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 Y_RNA.458-201ENST00000384240 102 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 SNORD78.2-201ENST00000391076 69 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 SNORD12B-201ENST00000410433 91 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.22□□□□□ -2.05
SIX4Q9UIU6 AC004386.2-201ENST00000441858 148 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 AC010095.1-201ENST00000443543 144 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 HMGB3P3-201ENST00000510526 400 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 AC067942.3-201ENST00000512025 362 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 RN7SKP49-201ENST00000516675 260 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 AC121758.2-201ENST00000553271 193 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 AC008269.2-201ENST00000561915 1105 ntBASIC2.22□□□□□ -2.05
SIX4Q9UIU6 AC009127.3-201ENST00000570531 403 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms