Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
CHRNA9Q9UGM1 7SK.7-201ENST00000603504 247 ntBASIC1.22□□□□□ -2.21
CHRNA9Q9UGM1 AC040896.1-201ENST00000613819 479 ntBASIC1.22□□□□□ -2.21
CHRNA9Q9UGM1 AC006001.4-201ENST00000622243 395 ntBASIC1.22□□□□□ -2.21
CHRNA9Q9UGM1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.22□□□□□ -2.21
CHRNA9Q9UGM1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CHRNA9Q9UGM1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 SNORD50.1-201ENST00000362987 71 ntBASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 RNU6-417P-201ENST00000384712 107 ntBASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 RPL37P10-201ENST00000412884 288 ntBASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 AC079354.2-201ENST00000453523 154 ntBASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 RPL31P58-201ENST00000469001 379 ntBASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 AC019235.1-201ENST00000503847 207 ntBASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 AL512310.8-201ENST00000550183 120 ntBASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 AL137100.2-201ENST00000555786 315 ntBASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 MIR4742-201ENST00000581069 85 ntBASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 AC022432.1-201ENST00000595739 310 ntBASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CHRNA9Q9UGM1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 RNU6-790P-201ENST00000384479 105 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 RNU2-16P-201ENST00000410712 136 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 MTND1P1-201ENST00000445453 368 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 RPS29P29-201ENST00000456396 171 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 RNU7-95P-201ENST00000459222 64 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 MTCYBP18-201ENST00000501056 747 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 ACA59.1-201ENST00000515966 143 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 RNU6-1281P-201ENST00000516223 105 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 RNU6-58P-201ENST00000517143 103 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 PIGPP4-201ENST00000584447 307 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 POLR3GP2-201ENST00000588366 668 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 AC006504.8-201ENST00000621046 635 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 AC006435.5-201ENST00000624486 112 ntBASIC1.2□□□□□ -2.22
CHRNA9Q9UGM1 RNU6-1266P-201ENST00000362794 105 ntBASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 RPL21P1-201ENST00000399532 476 ntBASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 MIR1185-2-201ENST00000408687 86 ntBASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 RNU7-34P-201ENST00000459394 64 ntBASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 AC019176.1-201ENST00000518519 225 ntBASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 AP003033.1-201ENST00000527244 415 ntBASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 MIR3664-201ENST00000579074 99 ntBASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 MZT1P2-201ENST00000604387 248 ntBASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 AC099654.5-201ENST00000636479 350 ntBASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 AC099654.12-201ENST00000639868 649 ntBASIC1.19□□□□□ -2.22
CHRNA9Q9UGM1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 Y_RNA.212-201ENST00000364177 102 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 SNORD116-1-201ENST00000384335 95 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 AL590002.1-201ENST00000406554 418 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 RNU6-908P-201ENST00000410160 94 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 RNU6-1068P-201ENST00000410958 103 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 MTND1P29-201ENST00000448112 647 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 RPL39P38-201ENST00000467018 153 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 AC083904.1-201ENST00000487828 231 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 MTND1P15-201ENST00000579262 949 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 MIR4769-201ENST00000584126 77 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 AP000942.3-201ENST00000603702 160 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.18□□□□□ -2.22
CHRNA9Q9UGM1 Y_RNA.319-201ENST00000365138 92 ntBASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 SNORA4.2-201ENST00000365313 147 ntBASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 RNU6-596P-201ENST00000365395 98 ntBASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 RNU6-331P-201ENST00000384724 107 ntBASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 AC016909.1-201ENST00000415916 166 ntBASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 RPS27P1-201ENST00000450552 247 ntBASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 RNU7-99P-201ENST00000516271 62 ntBASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 MIR3684-201ENST00000579779 74 ntBASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 AL138726.1-201ENST00000614873 333 ntBASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 AL359757.2-201ENST00000624309 274 ntBASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 MIR1321-201ENST00000637766 79 ntBASIC1.17□□□□□ -2.22
CHRNA9Q9UGM1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
CHRNA9Q9UGM1 MIR378A-201ENST00000362177 66 ntBASIC1.16□□□□□ -2.22
CHRNA9Q9UGM1 SNORA7.1-201ENST00000363750 139 ntBASIC1.16□□□□□ -2.22
CHRNA9Q9UGM1 Y_RNA.490-201ENST00000384413 102 ntBASIC1.16□□□□□ -2.22
CHRNA9Q9UGM1 MIR32-201ENST00000384965 70 ntBASIC1.16□□□□□ -2.22
CHRNA9Q9UGM1 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
CHRNA9Q9UGM1 RNA5SP467-201ENST00000391274 118 ntBASIC1.16□□□□□ -2.22
CHRNA9Q9UGM1 MRPL42P3-201ENST00000401492 326 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms