Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 MIR3646-201ENST00000578301 84 ntBASIC3.73□□□□□ -1.81
CNTN3Q9P232 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.73□□□□□ -1.81
CNTN3Q9P232 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.73□□□□□ -1.81
CNTN3Q9P232 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CNTN3Q9P232 AP003122.5-201ENST00000527668 3766 ntBASIC3.73□□□□□ -1.81
CNTN3Q9P232 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CNTN3Q9P232 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CNTN3Q9P232 MIR15B-201ENST00000385045 98 ntBASIC3.72□□□□□ -1.81
CNTN3Q9P232 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CNTN3Q9P232 AL606845.1-201ENST00000404881 255 ntBASIC3.72□□□□□ -1.81
CNTN3Q9P232 RPL23AP7-203ENST00000449021 469 ntBASIC3.72□□□□□ -1.81
CNTN3Q9P232 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.72□□□□□ -1.81
CNTN3Q9P232 CENPBD1P1-201ENST00000464061 469 ntBASIC3.72□□□□□ -1.81
CNTN3Q9P232 RNA5SP112-201ENST00000515937 99 ntBASIC3.72□□□□□ -1.81
CNTN3Q9P232 MIR4425-201ENST00000580572 84 ntBASIC3.72□□□□□ -1.81
CNTN3Q9P232 MIR548AY-201ENST00000617669 107 ntBASIC3.72□□□□□ -1.81
CNTN3Q9P232 TUG1_4.1-201ENST00000619464 181 ntBASIC3.72□□□□□ -1.81
CNTN3Q9P232 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.72□□□□□ -1.81
CNTN3Q9P232 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CNTN3Q9P232 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CNTN3Q9P232 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.71□□□□□ -1.82
CNTN3Q9P232 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CNTN3Q9P232 Y_RNA.127-201ENST00000363386 109 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 Y_RNA.273-201ENST00000364703 102 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 U8.7-201ENST00000364940 136 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 MIR184-201ENST00000384962 84 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 SNORD37.2-201ENST00000391075 66 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 MIR1283-1-201ENST00000408494 87 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 MIR1294-201ENST00000408503 142 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 RNU7-57P-201ENST00000459540 60 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 RPL21P10-201ENST00000463521 490 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 RN7SL601P-201ENST00000471221 293 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 RPL36AP21-201ENST00000490372 323 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 FCF1P8-201ENST00000510322 597 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 RNU7-115P-201ENST00000516433 55 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.71□□□□□ -1.82
CNTN3Q9P232 AC103810.1-201ENST00000579873 453 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 LARP7P3-201ENST00000579888 337 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 MIR4765-201ENST00000585007 77 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 MIR4753-201ENST00000585119 83 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 AL359881.1-201ENST00000602916 267 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 AC096577.2-201ENST00000611455 153 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 AC022149.2-201ENST00000621061 203 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 MIR3658-201ENST00000636291 56 ntBASIC3.71□□□□□ -1.82
CNTN3Q9P232 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CNTN3Q9P232 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CNTN3Q9P232 MAPK10-362ENST00000641864 4484 ntBASIC3.7□□□□□ -1.82
CNTN3Q9P232 RNA5SP387-201ENST00000364226 106 ntBASIC3.7□□□□□ -1.82
CNTN3Q9P232 MIR518C-201ENST00000384822 101 ntBASIC3.7□□□□□ -1.82
CNTN3Q9P232 RPS29P12-201ENST00000460178 152 ntBASIC3.7□□□□□ -1.82
CNTN3Q9P232 RAC1P5-201ENST00000512182 576 ntBASIC3.7□□□□□ -1.82
CNTN3Q9P232 RNU6-971P-201ENST00000516920 106 ntBASIC3.7□□□□□ -1.82
CNTN3Q9P232 AC091953.5-201ENST00000622919 233 ntBASIC3.7□□□□□ -1.82
CNTN3Q9P232 AC068647.2-201ENST00000637380 353 ntBASIC3.7□□□□□ -1.82
CNTN3Q9P232 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CNTN3Q9P232 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CNTN3Q9P232 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CNTN3Q9P232 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.69□□□□□ -1.82
CNTN3Q9P232 SNORD116-14-201ENST00000383894 92 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 SNORD116-17-201ENST00000383929 92 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 RNU6-1083P-201ENST00000384022 107 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 RNU6-1323P-201ENST00000384025 107 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 SNORA20B-201ENST00000384220 132 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 SNORD116-15-201ENST00000384445 92 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 SNORD116-19-201ENST00000384729 92 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 MT-TT-201ENST00000387460 66 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 SNORA36B-201ENST00000410438 131 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CNTN3Q9P232 AC005326.1-201ENST00000429197 123 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 AL121890.1-201ENST00000435457 205 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 AL357552.1-201ENST00000445254 415 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 RNU7-14P-201ENST00000459331 62 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 AC117454.1-201ENST00000491120 168 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.69□□□□□ -1.82
CNTN3Q9P232 AC010598.1-201ENST00000510378 103 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.69□□□□□ -1.82
CNTN3Q9P232 RNU7-116P-201ENST00000516940 62 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.69□□□□□ -1.82
CNTN3Q9P232 AP003357.1-201ENST00000604497 148 ntBASIC3.69□□□□□ -1.82
CNTN3Q9P232 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CNTN3Q9P232 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNTN3Q9P232 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CNTN3Q9P232 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
CNTN3Q9P232 Y_RNA.71-201ENST00000362892 104 ntBASIC3.68□□□□□ -1.82
CNTN3Q9P232 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CNTN3Q9P232 AL139095.1-201ENST00000404326 391 ntBASIC3.68□□□□□ -1.82
CNTN3Q9P232 AL355796.1-201ENST00000406706 323 ntBASIC3.68□□□□□ -1.82
CNTN3Q9P232 RNU4-43P-201ENST00000410628 137 ntBASIC3.68□□□□□ -1.82
CNTN3Q9P232 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.68□□□□□ -1.82
CNTN3Q9P232 AC009414.1-201ENST00000427200 443 ntBASIC3.68□□□□□ -1.82
CNTN3Q9P232 SEM1P1-201ENST00000506694 209 ntBASIC3.68□□□□□ -1.82
CNTN3Q9P232 snoZ196.1-201ENST00000625269 89 ntBASIC3.68□□□□□ -1.82
CNTN3Q9P232 MIR6844-201ENST00000637122 62 ntBASIC3.68□□□□□ -1.82
CNTN3Q9P232 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CNTN3Q9P232 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.68□□□□□ -1.82
CNTN3Q9P232 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CNTN3Q9P232 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CNTN3Q9P232 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.68□□□□□ -1.82
CNTN3Q9P232 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CNTN3Q9P232 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 276.7 ms