Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 RNU1-100P-201ENST00000365255 165 ntBASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 RNU6-793P-201ENST00000384233 104 ntBASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 RNU6-1248P-201ENST00000391096 64 ntBASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 U3.40-201ENST00000408706 208 ntBASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 RNU6-561P-201ENST00000516222 102 ntBASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 RNU6-1007P-201ENST00000516586 107 ntBASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 SNORA31.23-201ENST00000517219 133 ntBASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 RNA5SP291-201ENST00000517222 105 ntBASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 AC245166.1-201ENST00000521012 253 ntBASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 AL110115.1-201ENST00000614396 364 ntBASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 Y_RNA.24-201ENST00000362508 103 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 RNU6-778P-201ENST00000363269 103 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 RNU6-140P-201ENST00000384566 108 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 MIR325-201ENST00000385260 98 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 SNORD37.2-201ENST00000391075 66 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 FTH1P15-201ENST00000406984 280 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 RPS26P42-201ENST00000413485 326 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 EEF1A1P41-201ENST00000414667 207 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 AP002884.2-201ENST00000471647 395 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 RNU2-56P-201ENST00000516826 190 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 CYCSP23-201ENST00000519781 313 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 AC136628.3-201ENST00000521868 290 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 AL359198.2-201ENST00000611836 194 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 MIR7106-201ENST00000612419 65 ntBASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.14□□□□□ -1.91
SMPD4Q9NXE4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 AC010329.5-201ENST00000623497 2174 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 Y_RNA.251-201ENST00000364551 99 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 Y_RNA.293-201ENST00000364908 93 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 Y_RNA.294-201ENST00000364916 102 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 SNORA22-201ENST00000383907 134 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 RNU6-768P-201ENST00000384683 107 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 MT-TT-201ENST00000387460 66 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 SNORA26.3-201ENST00000391119 136 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 RNA5SP89-201ENST00000410300 108 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 AL158823.1-201ENST00000418441 478 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 AC092047.1-201ENST00000424997 240 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 AC245047.8-201ENST00000456455 284 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 RNA5SP217-201ENST00000515959 91 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 SNORA31.16-201ENST00000516773 139 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 Y_RNA.712-201ENST00000517011 92 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 CR383656.8-201ENST00000549046 145 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 AP002826.1-201ENST00000608835 315 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 AC107294.3-201ENST00000609211 526 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 AC012640.5-201ENST00000623897 319 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 AP001340.1-201ENST00000624405 217 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 MIR3529-201ENST00000637713 78 ntBASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMPD4Q9NXE4 AC118273.1-201ENST00000525324 3006 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 AC073325.2-201ENST00000339545 159 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 RNU6-324P-201ENST00000363957 106 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 RNU6-1180P-201ENST00000364935 107 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 SNORA8.3-201ENST00000384679 139 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 AL591034.1-201ENST00000407447 340 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 AC012306.1-201ENST00000423267 114 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 AC244670.1-201ENST00000436879 112 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 AC107083.1-201ENST00000439643 279 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 AC009237.8-201ENST00000445492 379 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 MTATP6P7-201ENST00000453315 681 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 AC007215.1-201ENST00000464893 276 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 AC115990.1-201ENST00000526957 301 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 AP001328.1-201ENST00000528550 176 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 AC021231.3-201ENST00000558497 370 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 U7.2-201ENST00000607576 63 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 MIR6134-201ENST00000617606 109 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 AC007318.2-201ENST00000620999 243 ntBASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMPD4Q9NXE4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.11□□□□□ -1.91
SMPD4Q9NXE4 RNU6-235P-201ENST00000362644 107 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms