Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 ZNF299P-201ENST00000406845 1804 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 SNORA33-201ENST00000363664 130 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-595P-201ENST00000363944 107 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 Y_RNA.287-201ENST00000364853 94 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 Y_RNA.490-201ENST00000384413 102 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 MIR504-201ENST00000385065 83 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 AC008134.1-201ENST00000420943 193 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 AL139396.1-201ENST00000421137 167 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 USP9YP30-201ENST00000430729 455 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 AL445305.1-201ENST00000432577 575 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 SNORD5.1-201ENST00000458800 75 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 RNU7-175P-201ENST00000515915 61 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 AC134698.4-201ENST00000523451 826 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 UBL5P4-201ENST00000562584 236 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 MIR3945-201ENST00000581853 98 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 AC018638.8-201ENST00000588755 281 ntBASIC1.51□□□□□ -2.17
ZCCHC3Q9NUD5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 AC006026.1-201ENST00000444025 1803 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 U3.8-201ENST00000363675 217 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-1059P-201ENST00000363752 98 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-280P-201ENST00000364145 104 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-842P-201ENST00000384269 107 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-417P-201ENST00000384712 107 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 RNU1-78P-201ENST00000391248 165 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 AL356776.1-201ENST00000406574 447 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 RPL30P16-201ENST00000419341 429 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-329P-201ENST00000459618 107 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 AP000889.1-201ENST00000530968 660 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 AL590705.4-201ENST00000532209 134 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 AK6P2-201ENST00000549020 471 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 MIR4790-201ENST00000577799 79 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 MIR6128-201ENST00000615528 109 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 AC007014.2-201ENST00000615581 479 ntBASIC1.5□□□□□ -2.17
ZCCHC3Q9NUD5 AC100821.1-201ENST00000523153 2479 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 MIR302D-201ENST00000362275 68 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 RNU5F-3P-201ENST00000363767 117 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-271P-201ENST00000363858 105 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 SNORD87-201ENST00000364849 89 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-1240P-201ENST00000365155 104 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 Y_RNA.405-201ENST00000383979 100 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 Y_RNA.451-201ENST00000384200 100 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-793P-201ENST00000384233 104 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 Y_RNA.524-201ENST00000384564 100 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 Y_RNA.561-201ENST00000384694 100 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 MIR10B-201ENST00000385011 110 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-510P-201ENST00000391239 108 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 MIR1253-201ENST00000408273 105 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 AL161935.2-201ENST00000414627 60 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 AC073910.1-201ENST00000445047 438 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 snoU13.15-201ENST00000459407 104 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 AC091179.3-201ENST00000474761 144 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 MTND5P5-201ENST00000503764 376 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 AC116337.1-201ENST00000509680 687 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 AC024995.1-201ENST00000523014 93 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 MIR4255-201ENST00000579351 72 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 AC095038.3-201ENST00000634439 195 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 AC068137.4-201ENST00000638485 296 ntBASIC1.49□□□□□ -2.17
ZCCHC3Q9NUD5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 Y_RNA.67-201ENST00000362870 100 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 Y_RNA.86-201ENST00000363020 111 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-727P-201ENST00000363592 107 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 Y_RNA.415-201ENST00000384012 112 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 SNORA26.9-201ENST00000391322 122 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 MIR1185-2-201ENST00000408687 86 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 EIF1P1-201ENST00000421436 341 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 HSPE1P24-201ENST00000450782 238 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 snoU13.27-201ENST00000459278 104 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 Y_RNA.682-201ENST00000516457 100 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 AF235103.2-201ENST00000525753 346 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 AC139792.2-201ENST00000624218 587 ntBASIC1.48□□□□□ -2.17
ZCCHC3Q9NUD5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 ICE2P2-201ENST00000483823 2787 ntBASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 RNA5SP467-201ENST00000391274 118 ntBASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 MIR1289-2-201ENST00000408360 111 ntBASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 USMG5P1-201ENST00000425964 177 ntBASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 AC007677.1-201ENST00000445757 515 ntBASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 AP000870.1-201ENST00000472927 406 ntBASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 AC093303.1-201ENST00000514549 295 ntBASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 MIR4742-201ENST00000581069 85 ntBASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 BNIP3P10-201ENST00000605360 577 ntBASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.47□□□□□ -2.17
ZCCHC3Q9NUD5 Y_RNA.179-201ENST00000363844 90 ntBASIC1.46□□□□□ -2.18
ZCCHC3Q9NUD5 SNORA4.2-201ENST00000365313 147 ntBASIC1.46□□□□□ -2.18
ZCCHC3Q9NUD5 RNU6-203P-201ENST00000384038 104 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms