Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC099654.5-201ENST00000636479 350 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 Y_RNA.132-201ENST00000363421 102 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 RNU6-595P-201ENST00000363944 107 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 SNORD48-201ENST00000364953 64 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 Y_RNA.529-201ENST00000384586 119 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 MIR1283-1-201ENST00000408494 87 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 RNU6-370P-201ENST00000411008 104 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 AC010531.2-201ENST00000465012 153 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 SCARNA16.2-201ENST00000516520 172 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 RNU6-1198P-201ENST00000516904 67 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 Y_RNA.708-201ENST00000516950 96 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 MIR3618-201ENST00000580330 88 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 MIR5006-201ENST00000583027 110 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SMC4Q9NTJ3 Y_RNA.405-201ENST00000383979 100 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 RNU6-245P-201ENST00000384020 107 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.451-201ENST00000384200 100 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.490-201ENST00000384413 102 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.524-201ENST00000384564 100 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.561-201ENST00000384694 100 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 AL353997.1-201ENST00000432936 108 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 MTCO3P8-201ENST00000453691 755 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 snoU13.30-201ENST00000458951 104 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 AC067942.3-201ENST00000512025 362 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.702-201ENST00000516843 96 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 MTND4LP32-201ENST00000636111 270 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 AL669831.3-213ENST00000636676 183 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 AC112487.2-201ENST00000637950 304 ntBASIC2.21□□□□□ -2.06
SMC4Q9NTJ3 ZNF299P-201ENST00000406845 1804 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 RNU6-593P-201ENST00000364716 112 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.646-201ENST00000410980 101 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 MTND4LP11-201ENST00000422184 280 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 MTCO3P10-201ENST00000455912 772 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 HMGN2P23-201ENST00000456759 269 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 RNA5SP458-201ENST00000516188 119 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 RNU6-344P-201ENST00000516635 111 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 RNU6-856P-201ENST00000516959 98 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 AC134698.4-201ENST00000523451 826 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 FRG2DP-202ENST00000566967 323 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 AC104581.2-201ENST00000572227 430 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 AC024614.2-201ENST00000577584 372 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 MIR4713-201ENST00000582691 75 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 AC005296.1-201ENST00000616145 209 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 AC022513.1-201ENST00000624512 117 ntBASIC2.2□□□□□ -2.06
SMC4Q9NTJ3 ZNF204P-201ENST00000416749 2397 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 RNU6-874P-201ENST00000362390 105 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 RNU6-545P-201ENST00000362681 104 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 RNU6-1188P-201ENST00000363795 107 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 RNU6-310P-201ENST00000384655 107 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 MIR153-2-201ENST00000385225 87 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.635-201ENST00000459041 101 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 AC114982.1-201ENST00000469402 321 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 RNU6-250P-201ENST00000516958 103 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 RNU6-58P-201ENST00000517143 103 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 SUMO2P18-201ENST00000518873 252 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 AC093027.1-201ENST00000546698 429 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 AC027288.2-201ENST00000553028 243 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 UBL5P4-201ENST00000562584 236 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 MIR5701-3-201ENST00000578890 82 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 MIR4753-201ENST00000585119 83 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 MIR5701-1-201ENST00000585138 82 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 AC010900.2-201ENST00000604508 210 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 AL355802.3-201ENST00000607571 545 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 MIR5701-2-201ENST00000615634 82 ntBASIC2.19□□□□□ -2.06
SMC4Q9NTJ3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 Y_RNA.356-201ENST00000365475 113 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 SNORD116-29-201ENST00000384516 83 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 MIR586-201ENST00000385035 97 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 CYCSP49-201ENST00000420810 319 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 RPL31P63-201ENST00000422565 375 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 RNU6-559P-201ENST00000516151 98 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 RNVU1-2-201ENST00000516326 135 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 AL590705.4-201ENST00000532209 134 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 AL355375.2-201ENST00000574825 175 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 MIR3122-201ENST00000577243 73 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 7SK.7-201ENST00000603504 247 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 AC113139.1-201ENST00000605049 239 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 AC008873.1-201ENST00000625051 138 ntBASIC2.18□□□□□ -2.06
SMC4Q9NTJ3 MIR1302-1-201ENST00000637932 143 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 260.1 ms