Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG3Q9NT62 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.89□□□□□ -1.79
ATG3Q9NT62 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG3Q9NT62 AL356157.2-201ENST00000605122 111 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 MIR6129-201ENST00000616087 109 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.89□□□□□ -1.79
ATG3Q9NT62 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 U2.21-201ENST00000637295 81 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ATG3Q9NT62 RNU6-799P-201ENST00000363567 107 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 RNU6-805P-201ENST00000365643 106 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 RPL23AP58-201ENST00000440453 469 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.88□□□□□ -1.79
ATG3Q9NT62 AC010099.1-201ENST00000455434 375 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 AC146507.2-201ENST00000460608 476 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 AC092991.1-201ENST00000477176 376 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 AC083906.5-201ENST00000503722 328 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 RN7SKP164-201ENST00000516138 266 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 RNA5SP380-201ENST00000517190 98 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 SCARNA20.6-201ENST00000517251 106 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 AC009127.3-201ENST00000570531 403 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 MIR3613-201ENST00000579844 87 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 AC134026.1-201ENST00000623249 2239 ntBASIC3.88□□□□□ -1.79
ATG3Q9NT62 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ATG3Q9NT62 RNU6-140P-201ENST00000384566 108 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 MIR626-201ENST00000385032 94 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
ATG3Q9NT62 AL512633.1-201ENST00000399931 655 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG3Q9NT62 AL109933.2-201ENST00000452651 260 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 AC006026.2-201ENST00000457376 180 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 HMGN1P18-201ENST00000457642 277 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 AC016925.1-201ENST00000458303 298 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG3Q9NT62 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATG3Q9NT62 SNORD59.2-201ENST00000516873 68 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 RNU2-12P-201ENST00000517216 168 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 SNORA31.23-201ENST00000517219 133 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 AC109810.1-201ENST00000534066 224 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 CYCSP26-201ENST00000534107 320 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 AC079600.2-201ENST00000550076 130 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 AC127455.1-201ENST00000565496 145 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG3Q9NT62 AL670379.2-201ENST00000604983 252 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 AC019159.1-201ENST00000605094 187 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 AC013412.1-201ENST00000610687 192 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 AC011603.4-201ENST00000611325 277 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 Y_RNA.802-201ENST00000614892 130 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG3Q9NT62 TUG1_4.1-201ENST00000619464 181 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG3Q9NT62 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
ATG3Q9NT62 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATG3Q9NT62 AL136360.1-201ENST00000503377 1900 ntBASIC3.87□□□□□ -1.79
ATG3Q9NT62 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.87□□□□□ -1.79
ATG3Q9NT62 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG3Q9NT62 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG3Q9NT62 MAPK10-322ENST00000641485 4530 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
ATG3Q9NT62 RNU6-727P-201ENST00000363592 107 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 RNU6-1048P-201ENST00000364054 107 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 RNU6-454P-201ENST00000364292 107 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 RNU6-1141P-201ENST00000364520 107 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 SNORA14A-201ENST00000364773 135 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 RNU1-100P-201ENST00000365255 165 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 RN7SKP61-201ENST00000410642 295 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 RNA5SP184-201ENST00000411071 108 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 AC096649.2-201ENST00000416186 393 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.86□□□□□ -1.79
ATG3Q9NT62 AC016632.1-201ENST00000503994 196 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 SCGB1D5P-201ENST00000515134 247 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 RNA5SP54-201ENST00000516951 92 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 AC104027.1-201ENST00000521887 300 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 AC099778.2-201ENST00000610904 211 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 AC007318.2-201ENST00000620999 243 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 MIR3674-201ENST00000636576 68 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG3Q9NT62 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
ATG3Q9NT62 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG3Q9NT62 MTND5P32-201ENST00000560711 1802 ntBASIC3.86□□□□□ -1.79
ATG3Q9NT62 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG3Q9NT62 ZNF702P-202ENST00000434269 1966 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 AC099654.7-201ENST00000635788 2127 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG3Q9NT62 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG3Q9NT62 RNU6-199P-201ENST00000362954 107 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 RNU6-778P-201ENST00000363269 103 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 RNU6-103P-201ENST00000363686 107 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 RNU6-793P-201ENST00000384233 104 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 RNU6-1248P-201ENST00000391096 64 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 FTH1P15-201ENST00000406984 280 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 U3.40-201ENST00000408706 208 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 RNU6-1064P-201ENST00000410626 104 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG3Q9NT62 EEF1B2P7-201ENST00000451177 676 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 snoU13.28-201ENST00000459235 104 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.85□□□□□ -1.79
ATG3Q9NT62 SNORA72.7-201ENST00000516349 94 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 CYCSP23-201ENST00000519781 313 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms