Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 AC138305.3-201ENST00000624988 240 ntBASIC2.12□□□□□ -2.07
SLC6A13Q9NSD5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 MIR369-201ENST00000362155 70 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 RNY3P11-201ENST00000364153 102 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 SNORD114-6-201ENST00000364393 72 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-1145P-201ENST00000384246 107 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-1235P-201ENST00000384559 107 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 MIR1283-2-201ENST00000408621 87 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.595-201ENST00000410403 105 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 BX510359.4-201ENST00000423750 193 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 AL137792.2-201ENST00000443484 235 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-498P-201ENST00000459468 107 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 SNRPGP18-201ENST00000553000 214 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 AC078899.2-201ENST00000595282 212 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 AL590240.4-201ENST00000616908 390 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 U2.1-201ENST00000618978 145 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 uc_338.22-201ENST00000622722 187 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 AC009487.4-201ENST00000624969 3585 ntBASIC2.11□□□□□ -2.07
SLC6A13Q9NSD5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 RNA5SP289-201ENST00000362332 137 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.11-201ENST00000362375 109 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-23P-201ENST00000363283 107 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 U3.8-201ENST00000363675 217 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 SNORD87-201ENST00000364849 89 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 XGY1-201ENST00000381172 446 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-418P-201ENST00000384035 107 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-318P-201ENST00000384283 103 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 MIR628-201ENST00000385229 95 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 AC007677.1-201ENST00000445757 515 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-948P-201ENST00000516374 107 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 RNU6-856P-201ENST00000516959 98 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 RNU2-19P-201ENST00000517288 84 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 AP002770.2-201ENST00000543613 532 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 MIR3169-201ENST00000578032 83 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 MIR4272-201ENST00000635924 64 ntBASIC2.1□□□□□ -2.07
SLC6A13Q9NSD5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.39-201ENST00000362620 98 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 RNA5SP493-201ENST00000364115 91 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.394-201ENST00000383942 103 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 Y_RNA.445-201ENST00000384168 102 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 U3.40-201ENST00000408706 208 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 CHEK2P4-201ENST00000450340 246 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 RNU7-57P-201ENST00000459540 60 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 AC055731.1-201ENST00000474387 401 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 AL442163.3-201ENST00000554110 156 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 VN1R91P-201ENST00000594377 169 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 AC092447.9-201ENST00000603395 144 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 AL138825.1-201ENST00000618587 192 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 AC009831.4-201ENST00000620744 325 ntBASIC2.09□□□□□ -2.07
SLC6A13Q9NSD5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.09□□□□□ -2.08
SLC6A13Q9NSD5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.09□□□□□ -2.08
SLC6A13Q9NSD5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.09□□□□□ -2.08
SLC6A13Q9NSD5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 RNY3P4-201ENST00000384428 101 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 MIR548B-201ENST00000385247 97 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 RNU11-3P-201ENST00000391111 133 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 RNA5SP450-201ENST00000411206 102 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 UQCRBP2-201ENST00000447827 297 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 AC016717.1-201ENST00000448918 286 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 AC074133.1-201ENST00000515696 183 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 AK6P2-201ENST00000549020 471 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 AC006600.1-201ENST00000572529 153 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 AC007229.1-201ENST00000590455 412 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 AL590808.1-201ENST00000618696 141 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 snoZ196.1-201ENST00000625269 89 ntBASIC2.08□□□□□ -2.08
SLC6A13Q9NSD5 Y_RNA.813-201ENST00000364639 102 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 RNY1P14-201ENST00000384426 108 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 MIR221-201ENST00000385135 110 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 MIR1261-201ENST00000408659 82 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 RNU6-57P-201ENST00000411348 103 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 AC096644.2-201ENST00000429278 159 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 HMGN2P3-201ENST00000433603 273 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 HMGN2P5-201ENST00000436882 273 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 MTND2P29-201ENST00000438595 412 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 PCNPP5-201ENST00000452246 481 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms