Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 SNORA25.9-201ENST00000365087 128 ntBASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-994P-201ENST00000410507 111 ntBASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 TAF9P1-201ENST00000445421 515 ntBASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 TAF9P2-201ENST00000454958 515 ntBASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-344P-201ENST00000516635 111 ntBASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-405P-201ENST00000516637 110 ntBASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-467P-201ENST00000517027 110 ntBASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 RNA5SP454-201ENST00000517231 127 ntBASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 AC090572.1-201ENST00000519251 160 ntBASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 MIR4431-201ENST00000579990 94 ntBASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 AL589743.1-201ENST00000551932 2712 ntBASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-83P-201ENST00000384568 112 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-1106P-201ENST00000390845 107 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 SNORD70.1-201ENST00000391007 85 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 MTCO2P34-201ENST00000421994 607 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 AL365184.2-201ENST00000431139 435 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU7-182P-201ENST00000459009 62 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU7-28P-201ENST00000516759 62 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 AP003716.2-201ENST00000528260 108 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 MIR3941-201ENST00000582572 103 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 AP000811.1-201ENST00000603803 651 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 AC100812.1-201ENST00000607622 580 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-94P-201ENST00000607728 107 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 AC004808.1-201ENST00000627671 721 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 AC099654.13-201ENST00000639774 207 ntBASIC0.03□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-1266P-201ENST00000362794 105 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU6-1200P-201ENST00000384162 107 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 MIR454-201ENST00000390180 115 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 RNA5SP219-201ENST00000390940 113 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 RPL31P35-201ENST00000431058 377 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 AC084290.1-201ENST00000434995 374 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 MTCO2P3-201ENST00000442543 421 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 AC079781.2-201ENST00000446424 169 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU1-117P-201ENST00000517041 158 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 MIR4775-201ENST00000581168 75 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 AL117336.2-201ENST00000602435 335 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 7SK.7-201ENST00000603504 247 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 AC122133.1-201ENST00000613964 233 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 MIR924-201ENST00000638017 53 ntBASIC0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU6-227P-201ENST00000362865 103 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 SNORD111-201ENST00000408139 94 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 MIR1827-201ENST00000408549 66 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 USP9YP29-201ENST00000445112 563 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AP000870.1-201ENST00000472927 406 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 MTCO3P23-201ENST00000561363 289 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AL078603.1-201ENST00000603824 313 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AC112191.3-201ENST00000604371 277 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AC018714.1-201ENST00000605028 208 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AL133173.2-201ENST00000614270 90 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 uc_338.11-201ENST00000619132 160 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 SCARNA4-201ENST00000629045 128 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 SEPT14P19-203ENST00000633205 211 ntBASIC0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 MIR103A1-201ENST00000362165 78 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU6-1029P-201ENST00000384109 107 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU6-1127P-201ENST00000384580 107 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 AL355143.1-201ENST00000407101 841 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 AC104850.1-201ENST00000435940 476 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 Vault.3-201ENST00000516676 95 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU2-56P-201ENST00000516826 190 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU6-612P-201ENST00000516909 102 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU6-430P-201ENST00000517078 107 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 AF235103.2-201ENST00000525753 346 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 AC022878.1-201ENST00000530684 149 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 BNIP3P39-201ENST00000601077 554 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 AC139792.3-201ENST00000623525 224 ntBASIC0□□□□□ -2.41
CTNNBIP1Q9NSA3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU4-45P-201ENST00000365469 141 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 MIR1185-1-201ENST00000408598 86 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AC010469.2-201ENST00000496412 480 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AGGF1P4-201ENST00000568249 801 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 LARP7P1-201ENST00000605576 316 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU6-85P-201ENST00000605989 107 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 SNORD11B-201ENST00000607707 90 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AC091304.9-201ENST00000612091 226 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 AC008133.2-201ENST00000624540 351 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 MIR6079-201ENST00000635807 62 ntBASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CTNNBIP1Q9NSA3 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 MIR526A1-201ENST00000384897 85 ntBASIC-0.02□□□□□ -2.41
CTNNBIP1Q9NSA3 RNA5SP511-201ENST00000410487 115 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms